KEGG   Larimichthys crocea (large yellow croaker): 104940043
Entry
104940043         CDS       T04659                                 
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
  KO
K04659  thrombospondin 2/3/4/5
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04145  Phagosome
lco04510  Focal adhesion
lco04512  ECM-receptor interaction
lco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104940043 (thbs2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104940043 (thbs2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104940043 (thbs2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104940043 (thbs2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104940043 (thbs2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104940043 (thbs2)
   00536 Glycosaminoglycan binding proteins [BR:lco00536]
    104940043 (thbs2)
Membrane trafficking [BR:lco04131]
 Endocytosis
  Phagocytosis
   Opsonins
    104940043 (thbs2)
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104940043 (thbs2)
  Exosomal proteins of colorectal cancer cells
   104940043 (thbs2)
  Exosomal proteins of bladder cancer cells
   104940043 (thbs2)
Glycosaminoglycan binding proteins [BR:lco00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104940043 (thbs2)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_CCN TSP1_ADAMTS cEGF Laminin_G_3 EGF Laminin_G_2
Other DBs
NCBI-GeneID: 104940043
NCBI-ProteinID: XP_010754909
Position
III:13449107..13466453
AA seq 1184 aa
MILRSLFLLLLSFHFLHAITEEGEQEDETSFDLFEISHITRKTLGAKQFRGQNSDAPAYR
FIRFDHLPPVSPPILKQILRQIQNNEGFVFVASIRQDRASRGTLIGLEGPDGRRQFEIVS
NGRANSLDLTYWVDGSQNVVSFEDVDLSDSQWKNITLHVHGENANLFVGCSLIDSFILDE
PFYEHLQAEGSRMYVAKGSIRENHFRGLLQNVRFIFDTTVEDILLSRDCEVTKQDDANIV
SESTEIVDVSPSITTNIIGQKTDEAGADMCERSCEELSTMFQELNGLRVVVSNLIDGLQK
VTEENTVMKEALGRMKNSKEKNMCWQDGRLFDDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPSFFDGECCPVCLSKDREDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCTG
PSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCE
GSGRETQRCTAQPCPIDGGWGPWSPWATCSATCGGGVKSRMRECNSPHPQHGGKKCIGEA
NDSDSCNKEDCPIDGCLSNPCFGGVDCNSSPDGSWECGPCPAGFRGNGTHCEDINECDMV
SDVCYKVSGTQRCINTDPGFHCLPCPKRYKGTQPFGMGVEAAKKNKQVCEPENPCKDKTH
NCHKYAECIYISHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLVCGANATYHCKK
DNCPSLPNSGQEDFDRDGQGDACDKDDDNDGILDERDNCPLLYNPRQFDFDKDEVGDRCD
NCPYEHNPAQIDTDHNGEGDACAVDIDGDEIMNENDNCPYVYNTDQKDTDMDGVGDQCDN
CPLLHNPDQIDVDNDLVGDHCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACD
YDDDDDGIPDDKDNCRLTPNADQLDSDGDGRGDACKDDFDNDSIPDILDVCPENSAISAT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN
LRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPELPTVFTR
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgatactcagaagtctcttcttgctgcttttatcatttcacttcctccatgcaataact
gaagaaggtgagcaggaggatgagacgtcatttgacttgtttgaaatcagccacatcaca
cgcaagactctgggggccaaacagttccggggccaaaactcagatgcccctgcttaccgc
ttcatccgcttcgaccacctgcccccagtgagcccccccatactaaaacaaatactacgt
cagatccaaaacaatgagggctttgtgtttgtggccagcatacgccaggaccgcgcctca
cggggcaccctgattggtttggagggtcctgatggccggcgccaatttgagattgtgtcc
aacggacgggccaactcactggacctgacatactgggtggacggctcacagaacgtggtt
tcattcgaggatgtggacctgtcggactcacagtggaagaatatcacacttcatgttcat
ggggaaaatgcaaacctgtttgtgggctgcagcctgatagacagcttcatcctggatgag
cctttctatgaacacctgcaggctgagggaagccgcatgtatgttgcgaagggatccatc
agggagaaccacttcaggggcctcctgcagaatgtgcgtttcatctttgacaccacagtg
gaagacatcctgctgagcagagactgcgaggtaactaaacaagatgacgctaatatcgtg
agcgagagcacagaaattgtggatgtgagtccctccatcactacaaacattataggtcag
aagacggacgaggctggcgcagatatgtgcgaacgctcctgtgaggagctcagcaccatg
ttccaggagctcaacggccttcgtgtagttgtcagtaaccttattgatggcttgcaaaaa
gtgacagaggagaacacagtcatgaaggaggcccttgggaggatgaagaactctaaagag
aaaaacatgtgctggcaggatggccgcctgtttgacgataaggaagactgggttgtggac
agctgcaccaaatgtacctgccaggagtccaagattgtgtgtcaccaaattacatgcccc
ccagtggcctgtgccagcccctcattttttgacggcgagtgctgccccgtgtgtttatct
aaagaccgtgaagatggctggtccccctggtcagagtggacagagtgtacagtcacctgc
gggacaggaactcaacaaaggggtcggtcatgtgatgcaaccagtaacccgtgcactgga
ccttctatccagacacgaaagtgcagtctgggcaaatgcgatagccgtgttcgccaggat
ggagggtggagtttgtggtcaccatggtcttcctgctcagtgacctgcggagaaggacag
atcaccagaatacgacactgtaatgctccagtgccacaactagggggcaaagactgtgag
ggaagtgggagagagactcagcgttgcactgcccagccttgtcccattgatggtggttgg
ggtccttggtccccatgggcaacctgttcagcaacatgtggagggggtgtcaaaagtcgg
atgcgtgagtgcaatagccctcatcctcagcatggtggcaagaagtgtatcggggaagcc
aacgacagtgacagctgtaacaaagaagactgtcctattgatggctgtctgtctaatcca
tgctttgggggagtggattgcaacagctctccagatggatcctgggagtgtggtccgtgc
cctgctggtttccgtggaaatggtacccactgtgaagacattaatgagtgtgacatggtg
tctgatgtttgctacaaagtgagtggaactcagcgctgcatcaacacagatccaggtttc
cactgtctgccctgtccaaagcgctacaagggcactcagccttttggtatgggtgtggag
gctgccaagaagaacaaacaggtgtgcgagccagagaacccatgcaaggacaagacccac
aactgtcacaaatatgccgaatgcatctacatcagccacttcagtgaccctatgtacaag
tgtgagtgtaggacgggttatgcaggagatggtttcatttgtggggaagactcagacttg
gatggctggcccaatcagaaccttgtgtgtggtgccaatgccacttaccactgcaagaag
gataactgccctagccttcctaactctggacaagaagactttgacagagatggacaagga
gatgcttgtgacaaggatgacgacaacgatggaattctagatgagagggacaactgtccc
ctcctttacaatcctcgtcagtttgactttgacaaggatgaagtcggcgatcgctgcgac
aactgtccctatgagcacaaccctgctcaaatagacactgaccacaatggagaaggggat
gcctgtgcagtggacattgatggagatgaaatcatgaatgagaacgacaactgcccctat
gtgtacaacactgaccagaaggacactgacatggatggagttggtgaccagtgtgacaac
tgtcctttgctacacaaccctgatcagattgatgtagacaatgacctggttggagatcat
tgtgataataaccaagacattgatgaagatggtcatcagaacaacctggacaactgtccc
tacgtggccaatgccaaccaggctgaccatgacaaggatggcaaaggagacgcatgtgac
tacgatgatgacgatgatggtatacctgatgacaaggacaactgcagactgacacccaat
gcagaccagctggactctgatggcgatggaagaggggatgcctgcaaagatgactttgac
aacgacagtatcccggatattcttgatgtgtgcccggagaacagtgccatcagtgccaca
gacttcaggaaattccagatggtccacttggatcccaagggaactactcaaattgatccc
aactgggtggtcagacatcagggtaaagagttggttcagactgccaattctgacccaggc
attgcagtcggttttgatgagttcaatgctgtggacttcagtggaacgatgtacgtgaac
acggacagagatgatgactatgcaggctttgtgttcggctaccagtcaagtgggcgcttt
tatgtagtgatgtggaagcagatcacacagacttactgggaggacaagccctccaaggcc
tttggcatttctggcgtttcgctcaaagttgtcaattcgaccactggcactggagaaaac
ctcaggaatgctttgtggcacacaggcaacactcctggacaggtgcgtactctctggcat
gaccccaaaaacattggttggaaggattacacagcttacaggtggcatctcatccataga
ccgaagactggtttcataagggttgtggtctatgaaggtaaacagatcatggctgactca
ggtccagtttatgacaagacgtttgccggaggaaggttaggcttgtttgtcttttcgcaa
gagctggtgttcttctccgacctcaagtatgagtgcagagacaagccggagttgccaaca
gtgttcacaagataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (55)   

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