KEGG   Lysobacter capsici: LC55x_3047
Entry
LC55x_3047        CDS       T04162                                 
Name
(GenBank) putative ATPase
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
lcp  Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_3047
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     LC55x_3047
SSDB
Motif
Pfam: HerA_C DUF87 ResIII AAA_22 FtsK_SpoIIIE AAA_30 SLFN-g3_helicase CbiA AAA_25 AAA_10 TrwB_AAD_bind AAA_19 AAA_16 T2SSE AAA_7
Other DBs
NCBI-ProteinID: ALN86310
UniProt: A0A0S2FRZ7
Position
3477145..3478680
AA seq 511 aa
MAPTPDARPNDILLGKAVTTPDSGLVYLHTKLGNRHGLVAGATGTGKTVTLMTLAEGFSR
QGVPVFLADVKGDVAGLAMPGAANDKLQSRLTEIGIADWAPGASPVVFWDLFGKLGHPVR
TTVSEMGPTLLARILELNDTQSGVLDIVFKLADDRGLLLLDLEDLRALLGLVADERKDIS
TSYGLVSTQSVGAIQRSLLRLEQEGGDHFFGEPALQLADLMRTSTDGRGVVNVLAADSLI
LKPRLYSSFLLWLLSELFEQLPEVGDIDKPKLVFVFDEAHLLFDDAPPALQQRVEQVVRI
IRSKGVGVYFCSQFPDDIPDNILGQLGNRVQHALRAFTPRDQKAVKTAAETFVPNPALNV
AEAISQLGTGEALVSTLQDKGVPMPVERTLIAPPRCRMGAITEAERAQVRATSPIGPKYD
TAINRESAAEMLLQRAQAATEQAQAPPAKTREQDDQEEGGFGQAVKDAVFGTKRRQGMVE
AMAKQTARTVGNQVGRQILRGLLGGIFGGKR
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggccccgacccccgacgcacgcccgaacgacatcctgctcggcaaggccgtcaccacg
cccgacagcggcctggtctatctgcacaccaagctcggcaaccgtcacggcttggtcgcc
ggcgccaccggcaccggcaagaccgtcaccctgatgaccctggccgaaggtttttcgcgc
cagggcgtgccggtgttcctggccgacgtcaaaggcgacgtggccggcctggcgatgccc
ggcgcggccaacgacaagctgcaatcgcggctgaccgagatcggtatcgccgactgggcg
ccgggcgccagtccggtggtgttctgggacctgttcggcaagctcggccatccggtgcgc
accacggtcagcgaaatgggcccgaccctgctggcgcgcattctcgaactcaacgacacc
cagtccggcgtgctcgacatcgtgttcaagctcgccgacgaccgcggcctgctgctgctc
gatctggaagacctgcgcgccctgctcggcctggtcgccgacgagcgcaaggacatctcg
accagctacggcctggtcagcacccagtcggtcggcgcgatccagcgttcgctgctgcgc
ctggaacaggaaggcggcgatcatttcttcggcgaaccggcgctgcagctggccgacctg
atgcgcaccagcaccgacggccgcggcgtggtcaacgtgctcgccgccgattcgctgatc
ctcaagccgcgcctgtactccagctttttgctgtggctgctgtcggaactgttcgaacag
ctgcccgaagtgggcgatatcgacaagcccaagctggtgttcgtgttcgacgaggcgcat
ctgttgttcgacgatgcgccgcccgcgctgcagcagcgggtcgaacaggtggtgcgcatc
atccgttccaagggcgtgggcgtgtacttctgctcgcagttccccgacgacatccccgac
aacatcctcggccagctcggcaaccgcgtgcagcacgcgctgcgcgcgttcaccccgcgc
gatcagaaggcggtcaagaccgcggcggaaaccttcgtgccgaacccggccttgaacgtg
gccgaggcgatctcgcagctcggcaccggcgaggcgctggtctcgaccctacaggacaag
ggcgtgccgatgccggtcgaacgcaccctgatcgcgccgccgcgctgccgcatgggcgcg
atcaccgaggccgaacgcgcccaggtgcgcgcgaccagcccgatcgggccgaagtacgac
accgcgatcaaccgcgagtccgccgccgagatgctgctgcagcgtgcccaggccgcgacc
gaacaggcgcaggcgccgccggccaagacccgcgaacaggacgatcaggaagaaggcggc
ttcggtcaggcggtcaaggacgcggtattcggcaccaagcgccgccagggcatggtcgag
gccatggccaagcagaccgcgcgcaccgtcggcaaccaggtcggccggcagatcctgcgc
ggcctgctcggcggcatcttcggcggcaagcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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