KEGG   Lysobacter capsici: LC55x_3496
Entry
LC55x_3496        CDS       T04162                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lcp  Lysobacter capsici
Pathway
lcp03030  DNA replication
lcp03430  Mismatch repair
lcp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LC55x_3496 (dnaQ)
   03430 Mismatch repair
    LC55x_3496 (dnaQ)
   03440 Homologous recombination
    LC55x_3496 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcp03032]
    LC55x_3496 (dnaQ)
   03400 DNA repair and recombination proteins [BR:lcp03400]
    LC55x_3496 (dnaQ)
Enzymes [BR:lcp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LC55x_3496 (dnaQ)
DNA replication proteins [BR:lcp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LC55x_3496 (dnaQ)
DNA repair and recombination proteins [BR:lcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LC55x_3496 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ALN86753
UniProt: A0A0S2FTI1
Position
complement(3928796..3929527)
AA seq 243 aa
MRQIILDTETTGLSWERGNRVVEIGCVEFVERRPSGRTYHQYIKPDCDFEAGAQEVTGLS
LERLANEPTMEQVVDEFLEFIKGAELIIHNAAFDVGFLNNELSICGAQYGKLADHVPNIE
DSLLLARQRYPGQRNSLDALCKRLGVDNSHRQLHGALLDAQLLGEVYIGLTSGQEEIGFG
DPAAIAAQQSPASFQIDPGAVRPRVIVLADEFAAHQARLEKLRKKAGKCVWDAFDPPAVV
AEA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcgtcaaatcatcctagataccgaaaccaccggcctgagctgggaacgcggcaaccgc
gtggtcgaaatcggctgcgtcgaattcgtcgagcgccgcccgagcggtcgcacctaccac
cagtacatcaagcccgattgcgatttcgaggccggcgcgcaggaagtcaccggcctgtcg
ctggagcgtctggccaacgagccgacgatggagcaggtggtcgatgaattcctcgaattc
atcaagggcgccgagctgatcatccacaacgcggccttcgacgtgggcttcctcaacaac
gagctatcgatctgcggcgcgcagtacggcaagttggccgaccacgttcccaacatcgaa
gattcgctgctgctcgcgcgccagcgttaccccggccagcgcaattcgctggacgcgttg
tgcaaacgcctgggcgtggacaattcgcaccgacagctgcacggcgcgctgctcgacgcc
cagttgctgggcgaggtctacatcggcctgacctcgggccaggaagagatcggcttcggc
gatccggccgcgatcgccgcgcagcagagcccggcgagtttccagatcgatccgggcgcg
gtgcggccgcgggtgatcgtgctcgccgacgaattcgccgcgcatcaggcgcggctggaa
aagctgcgcaagaaggccggcaagtgcgtgtgggatgcgttcgatccgccggcggtggtg
gccgaggcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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