KEGG   Lactobacillus crispatus: LCRIS_00860
Entry
LCRIS_00860       CDS       T01222                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
lcr  Lactobacillus crispatus
Pathway
lcr03030  DNA replication
lcr03430  Mismatch repair
lcr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LCRIS_00860 (holA)
   03430 Mismatch repair
    LCRIS_00860 (holA)
   03440 Homologous recombination
    LCRIS_00860 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcr03032]
    LCRIS_00860 (holA)
   03400 DNA repair and recombination proteins [BR:lcr03400]
    LCRIS_00860 (holA)
Enzymes [BR:lcr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LCRIS_00860 (holA)
DNA replication proteins [BR:lcr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LCRIS_00860 (holA)
DNA repair and recombination proteins [BR:lcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LCRIS_00860 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_delta DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: CBL50307
UniProt: D5H2S2
Position
862335..863321
AA seq 328 aa
MTLLSLFKNTNNNNPHTLIWGADDFLNDYLVRSYAKEDRFKDLEHVTVDCESDGLDELIA
SLTESSLFSEQKFIVVKNPFFLTAKVSKKLQKQIDDLQKIFENLADLEDVVVIVASYEKI
DRRKKLTKTVLKQFNVVEPQIRPYEVASTTKALIKDEGYIITQSALQLLIERSDQVIDTI
LSNYQKLKMVATDNKITEKSVMQNVDLSLAQNIFAILESALDKNYREAVERLDNQLREGT
NPIQLLAVFENQLELILVVKILAQRGRSEPQIVKELGVHPYRVKLALRNRLKIDKLENLL
RDAIDLEFKYKNGTYREDNFLKLFILNV
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaccttactttctttgtttaaaaatacaaataacaataatccacataccttaatttgg
ggtgcagatgactttctcaatgattacttggtgagatcatatgccaaggaagatcgcttt
aaagatttggagcacgtgactgtcgattgcgaaagcgatggcttagatgaattgattgcg
agcttaactgaatccagtttatttagtgaacagaaatttattgtagtcaaaaatcctttc
tttttaacagctaaggtatctaaaaaattacagaaacaaattgatgacttacaaaagatt
tttgaaaacttagctgatttagaagatgtagtagtaattgttgcttcttatgaaaaaatt
gataggcgtaaaaaactgactaaaactgttctaaagcaattcaatgtggttgagccacaa
attaggccctatgaagttgcttcaacgactaaagccttgatcaaagatgagggatatata
atcacacagtcagctttacagctgctaattgagcggagtgatcaggtaattgacactatt
ttaagcaattatcaaaagctaaaaatggtagctaccgataacaaaattactgaaaaatca
gtaatgcaaaatgtagatttgtccctagcacaaaatattttcgctattttggagtcggct
ttagataagaattaccgtgaagcagttgagcgcttagataatcaattacgtgaagggact
aatccaattcaattattagcggtctttgaaaatcaattagaattgattttggtcgttaag
atcttagcacaaagaggtcgtagcgaaccacaaattgtaaaagaattaggcgttcatccc
tatagggttaagttagccctacgtaatcggttgaagatagacaagctagaaaatttatta
agggatgcaatcgacttagaatttaaatataaaaatggaacttaccgagaagataatttt
ttgaaattatttatcttaaatgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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