KEGG T01955: LCBD

Lactobacillus casei BD-II: LCBD_1352

Entry

LCBD_1352 CDS T01955

Definition

hypothetical protein

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

lcs Lactobacillus casei BD-II

Pathway

lcs00300	Lysine biosynthesis
lcs00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:lcs00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:lcs00550]

SSDB

Motif

Pfam:

DUF1727 Mur_ligase_M zf-CHY UPF0547 DUF2296 DZR OrfB_Zn_ribbon Zn_Tnp_IS1595

Other DBs

NCBI-GI:

385823048

NCBI-GeneID:

12467701

UniProt:

F2MK91

Position

complement(1305234..1306586)

AA seq 450 aa
MAFSAKASLATAIGRSSYWFLHTFLKGGSSLPGQIANRIDPQVLRTLGQNYDVIVVTGTN
GKTLTTSLIVKVLKKKYKEVLTNPTGSNMLQGITTAFLAQPKRGHGRGIAVLEVDEANVA
PVAAQLKPKAFVLTNIFRDQMDRYGEFYTTYQKILDGVTRDPEAMVIANGDAPIFSSRKL
PNPVTYYGFELTANGDHKAPPNTDGVLCPVCQHILHYHAQTYANLGNYFCPHCGFKRPAL
THQITEVTQMTPQSSDFMIDDQPCHIDIGGMYNIYNALAAFAVGRAFGVTPTEISQAFAY
DEKVFGRQEVIQLGKKKLTLILVKNPVGLNQVLSMIETAKQPFGFAMLLNANYADGIDTS
WIWDGNFEELVASQKAASYLVGGERYKDIGLRLTVAGVPEKALVSKPALDDVISTLKRSP
QDQLYVLATYTAMLQLRKKLSDGGYIKAGF

NT seq 1353 nt +upstreamnt +downstreamnt
gtggcattttctgcaaaagctagcctggcaactgccattggtcgcagcagttactggttc
ttacacacatttctaaaaggcgggtcgagcctaccaggccagatcgccaaccgaattgat
ccccaagtcttgcggacgctcggtcaaaactacgatgttattgtggtgactggaacaaat
ggcaagacgttgaccaccagcctgattgttaaggtgcttaagaaaaaatataaagaagtc
ttaacgaaccccactggctccaacatgttgcaaggtatcacaacggcttttttggcccag
ccgaagcgcggtcatggccgcggtatcgctgtgctcgaagtcgatgaggccaatgttgca
ccagttgccgctcagttaaaacccaaggcctttgttctcaccaatattttccgcgaccag
atggaccgttatggggaattttataccacctatcagaaaattttagacggtgtgacacgc
gatcctgaagcgatggtcattgctaatggcgacgctccgattttcagctcccgaaagctg
cctaatccagtcacctactacggctttgaactcacggcaaatggcgatcataaagccccg
ccgaatacggacggtgtcttatgtccggtatgtcagcacattctgcactaccatgcacaa
acttacgccaatttgggcaattatttttgtccgcattgcggcttcaaacgccccgcttta
acccatcaaatcaccgaggtcacccaaatgaccccacaaagcagcgacttcatgattgat
gatcaaccatgccacatcgacatcggtggcatgtataacatctacaacgcgctcgccgcc
tttgctgttggccgggcgttcggtgttaccccgactgaaatcagccaagcttttgcttat
gacgagaaggtcttcggtcgtcaagaagtcattcaacttggcaagaaaaaattaaccttg
attttggttaaaaacccagtcggcctcaaccaggtcctcagcatgatcgaaaccgccaag
cagccgtttggttttgcaatgctgcttaatgccaattatgcagatggcattgatactagt
tggatttgggacggcaattttgaagaactcgttgccagtcaaaaggctgccagctatttg
gtcggcggcgaacgctacaaggacatcggtttacgccttacagtcgcaggtgtgcccgaa
aaagcgcttgtcagcaagccagctcttgatgatgtcatcagcaccttaaaacgctccccg
caagatcaactttacgttctggccacctatacagcaatgttgcaactacgcaagaaatta
agcgatggcgggtacatcaaagcagggttttag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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