KEGG   Lacticaseibacillus paracasei BD-II: LCBD_1455
Entry
LCBD_1455         CDS       T01955                                 
Name
(GenBank) Probable tRNA sulfurtransferase
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
lcs  Lacticaseibacillus paracasei BD-II
Pathway
lcs00730  Thiamine metabolism
lcs01100  Metabolic pathways
lcs01240  Biosynthesis of cofactors
lcs04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:lcs00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    LCBD_1455
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    LCBD_1455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcs03016]
    LCBD_1455
Enzymes [BR:lcs01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     LCBD_1455
Transfer RNA biogenesis [BR:lcs03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LCBD_1455
SSDB
Motif
Pfam: ThiI THUMP QueC ATP_bind_3
Other DBs
NCBI-ProteinID: AEA56952
UniProt: A0A806EA61
Position
1393977..1395194
AA seq 405 aa
MQYSEIMVRYGELSTKGKNRQAFIGRLNGNVTRALHEFPRLTIRPKRDRMHIELNGEPSD
QVMARLSQVFGIQNFSPSIAVEKDMDKVHAVALQLMNETAPKGISYKVNTRRSDHDFALD
TNAMNLDLGDYLTDKRPDLVVKMHQPDMILRVEVRREAIYLSTKTIQGAGGLPVGTAGKA
ALMLSGGIDSPVAGYYALKRGVDIEMVHFFSPPYTSQQALNKAKQLTAKLTPYVGRIYFI
EVPFTEIQEEIKAKVPEGYLMTVQRRLMLRLTEAIAQQRGDLAIFNGESVGQVASQTLES
MAAINDVTTMPIIRPVATMDKNEIIAEAEKIDTYDLSIMPFEDCCTIFAPPSPKTRPKTD
RARYYESKIDVAGLMDRALAGVKIQEIKSSDQFMNQDQDVIAELL
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgcaatattcagaaattatggttcgttatggcgaactttcgacaaaaggcaagaaccgt
caagcctttatcggccggttaaacggcaatgtcacccgtgctctgcacgagttccccaga
ctcacgattcgccctaagcgtgatcggatgcacatcgaattgaatggggagccgagtgat
caggtgatggctcggttatcacaagtttttggcattcaaaatttttcaccaagtattgcg
gttgaaaaagatatggataaggtacatgcagttgccttgcaattaatgaacgaaaccgcg
ccaaagggtattagctacaaggtcaacacgcgccgcagtgaccacgattttgccttagat
acaaacgccatgaatttggatctgggtgactatctgacagataagcggcctgatttggtt
gttaaaatgcatcagcccgacatgattctgcgggttgaagtccggcgcgaggcgatttat
ttgtccacgaagaccattcaaggggcaggtgggttgccagtcgggactgccggcaaagca
gctttgatgctaagtggcggcattgattcgccagtggctggctattacgcgttaaagcgg
ggtgtggacattgaaatggttcactttttcagcccgccgtacaccagccagcaggcactc
aacaaagctaaacaactgaccgcaaagttgacgccatatgtcggccggatttactttatc
gaagtgccatttacggaaattcaagaggaaatcaaggcgaaagtgccagaaggttatctc
atgaccgttcaacggcgattgatgttgcggctaacggaagccattgctcagcagcgtggc
gatctcgcgattttcaatggcgaatcggtcggtcaagttgcctcgcaaacgttggagtcg
atggcggcaatcaatgatgtgacaacgatgccgattattcgaccggtggcaacgatggat
aagaatgaaatcattgccgaagccgagaaaattgacacttatgatttgtcgatcatgcca
tttgaagattgctgcacgatttttgcgccgccttcaccgaaaactaggccaaagacggat
cgcgcgcgttactatgaaagcaaaattgatgtcgccggcttgatggatcgcgcactggct
ggcgtgaagattcaggagatcaagtcatcggatcaatttatgaatcaagatcaagatgtt
attgctgaattactttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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