KEGG   Lactobacillus casei BD-II: LCBD_1904Help
Entry
LCBD_1904         CDS       T01955                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lcs  Lactobacillus casei BD-II
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lcs00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LCBD_1904
Enzymes [BR:lcs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LCBD_1904
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LCBD_1904
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1855044..1855892)
Genome map
AA seq 282 aa AA seqDB search
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDASTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattaccgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgattatcagccatctgcgtatggaagggcgttat
tatgttgtcaaagatgcaagcacaccttttgataagcatgatcacgttacgttcacattt
caggatggtagtcagttgcggtatcgggatctgcgaaagttcggtcggatgcgattgatt
aaaactggtcaggaagatcaggtgccagctcttgctaagctcggaccggaaccaacgcca
cgcacgtttgacgagactgagtttgcccggcgcctgaaacgccatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgacaccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaatgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaaggtaccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccgcactgtcagccattacatcaaaggaggcgg
ccagcgtga

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