KEGG   Lacticaseibacillus paracasei W56: BN194_08460
Entry
BN194_08460       CDS       T02337                                 
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
  KO
K18692  ATP-dependent RNA helicase CshB [EC:3.6.4.13]
Organism
lcw  Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcw03019]
    BN194_08460 (cshB)
   03009 Ribosome biogenesis [BR:lcw03009]
    BN194_08460 (cshB)
Messenger RNA biogenesis [BR:lcw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BN194_08460 (cshB)
Ribosome biogenesis [BR:lcw03009]
 Prokaryotic type
  rRNA helicases
   BN194_08460 (cshB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD CMS1
Other DBs
NCBI-ProteinID: CCK21793
UniProt: A0A5Q8BSX0
Position
838209..839555
AA seq 448 aa
MENQFKQFQLKPFIIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVP
LLSMVDPTEDATQVVITAPSRELANQIYAVAQQLIQTEPAIRINRLVGGMDKQKQIDKLQ
NHQPHVAIGTPGRILDMIKSYDLVPSSVRHFVVDEADMTLDMGFLETVDAIASSFPDHLQ
MAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEH
MGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA
VLLERKRNTKIARRQALLAEKRKNRKRG
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggagaatcaattcaaacaatttcaactaaaaccttttattatcgatggtctcaatgca
atggccatcaccgccccgacacccattcaacaaaaagttattccagcgcttttgcgtggt
gaaaacattgttgggcaaagccagaccggtagcgggaaaactcacgcctttttggtaccc
ttactcagtatggtagatcctaccgaagatgcgactcaggtcgtgatcactgccccttca
cgtgagttagccaatcaaatttatgcggttgcccagcaactcatacaaactgagccggcg
attcggattaaccgtttagtcgggggaatggacaagcaaaagcagatcgacaagttgcaa
aatcatcaaccacatgtggctatcggaacgccaggtcgaatcttggacatgatcaaaagc
tatgatttagtgccatcgtctgtccgtcattttgtagtcgacgaagctgacatgacgctg
gatatgggcttcctcgaaacggttgatgcgattgcctcgagttttccagatcatctgcaa
atggctgttttttcggcgactattccgcaaaaactggaaccattcttgcgcaagtacatg
gacaatccaacgacgattgaattgaaaccgcagtcggtgattgctgacacggttgaaaac
attttgattgcggcaaaagggcgcgataaaaatgagttaatctatcagcttgtcacgatg
gggcatccctttttagtgctgatttttgctaacaccaaaaccagcgtggatgctatccat
gacttcttgaagcatcaaggtttgaaggtggctaagattcatggtggcattcagccgcga
gaacgtcggcgcgtgatgaaggatgttgccgacctcaaatatcagtatgtggtcgccacc
gatcttgctgctcggggtatcgatatcaagggggtctcaatggtcatcaatgccgagatt
ccccgcgacaacgagttctttattcaccgagtgggccgaaccggtcggaatggcatggct
ggtacagcggtgacactgtacgaaccgggacaggaagatcaaattgccgaattagagcat
atgggcattaagtttgcgccgaaaatgatcaaaaacggtgagcttgtcgacacttatgac
cgcaatcgtcgagttcaccgcaaaccgaagcaagaagacaccagtcttgccattcgcggt
ctggtgaaaaaggcaaagcaaaagcacatgccgaattatcgtaaaaagattcgaactgcg
gtgttattagaacgcaaacgaaataccaaaattgctcggcgccaagcgctgttagcagaa
aaacgcaagaaccgcaaacgagggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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