KEGG   Lactobacillus casei W56: BN194_18920Help
Entry
BN194_18920       CDS       T02337                                 

Definition
hypothetical protein
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lcw  Lactobacillus casei W56
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lcw00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BN194_18920
Enzymes [BR:lcw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BN194_18920
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BN194_18920
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1861333..1862232)
Genome map
AA seq 299 aa AA seqDB search
MKVIMDQLGSTLNKEISMPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQK
EIVGSEITTIDRRGKYLLMRLSNGETIISHLRMEGRYYVVKDASTPFDKHDHVTFTFQDG
SQLRYRDLRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVL
LDQTVVAGVGNIYADEVLWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAH
TYVDAEGNRGSFQNALHVYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq 900 nt NT seq  +upstreamnt  +downstreamnt
ttgaaagtcattatggaccaacttggttcgacgctaaataaggagatttcaatgcctgaa
ttacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaataaagtcatt
accgccatcaacactaactgggagaaaatcctgatcaatgggttggcgacttttcaaaag
gaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatcttttgatgcgc
ctcagcaatggtgaaacgattatcagccatctgcgtatggaagggcgttattatgttgtc
aaagatgcaagcacaccttttgataagcatgatcacgttacgttcacatttcaggatggt
agtcagttgcggtatcgggatctgcgaaagttcggtcggatgcgattgattaaaactggt
caggaagatcaggtgccagctcttgctaagctcggaccggaaccaacgccacgcacgttt
gacgagactgagtttgcccggcgcctgaaacgccatcataaaccgattaagtcggtttta
ctcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggtactttggtta
agtcggctcaatccgctgcagccagctgacaccttgaaatctaaagaaatcaaaacactg
catgacgcgattatccaagaattaaatgcagccattgcggcaggcggcaccagcgcgcat
acgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcacgtctatgat
cgggaaggtaccccgtgcgatcgctgcggcacgacgattgtcaaaattaaggttggtcag
cgcggaacccattactgcccgcactgtcagccattacatcaaaggaggcggccagcgtga

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