KEGG T02289: LDBPK

Leishmania donovani: LDBPK_261330

Entry

LDBPK_261330 CDS T02289

Definition

DNA ligase, putative

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ldo Leishmania donovani

Pathway

ldo03410	Base excision repair
ldo03420	Nucleotide excision repair
ldo03430	Mismatch repair
ldo03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ldo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ldo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ldo03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ldo03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2 DUF4379 Zn-ribbon_8

Other DBs

NCBI-GI:

398017065

NCBI-GeneID:

13388966

UniProt:

E9BIE5

Position

26:456708..458009

AA seq 433 aa
MQTPSNVSPVCMKMAVWRCSHCLQEFEMVVGHFIDGGGVCPHCHSPQKKLDNVTVRNAQG
ELVTKKPQYVKAPRMIHSNYRSVLFANPHWESLNIQPMLAQRWELVADELMKSSNGESGT
ASDKHLLLASPKIDGIRCMIGYNEKLREVQFFSRGGIVLECCHGLVPQLLPLFEKDPTLM
LDGELFAPECNFEQLNGLVRRLNKKSDPKIMEAQARLLEYFAFDIMYSAQLSSVSAPFDE
RYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVATAAAANGQAVKIYHVPAAQVHP
SDMEDVLNEACSQGFEGVMIRLPKFPYEHGKRSFGLLKYKQMHDAEFKIVGFVPGEGKFK
SALGAFVCTTKDGKHFNTPPKVSCKHRIELWEHRREYLGKYLTVQYQELSSQNVPRFPIA
KAIRGSEDKRDWL

NT seq 1302 nt +upstreamnt +downstreamnt
atgcagacgccgagcaatgtatcacccgtgtgcatgaagatggcggtgtggcgctgctct
cactgcttgcaggagttcgagatggtagtggggcactttattgatggaggcggcgtgtgc
ccgcattgccatagtccgcagaagaagctggacaacgtgacggtgcgcaacgcgcaaggg
gaactggtgaccaagaagccccaatacgtgaaggcgccgcgcatgattcactcgaactac
cgtagcgtgctcttcgccaatccccactgggagtcgctgaacattcagcccatgcttgcg
cagcgctgggagcttgtggcggacgagctcatgaagagcagcaacggcgagagcggcacc
gcttccgacaagcatctgctcctcgcctcccccaagatcgatggcatccgctgcatgatt
gggtacaacgagaagcttcgcgaggtacagttcttctctcgtggcggcatcgtcctcgag
tgctgccacggcctcgtcccgcagctgctgccgctctttgagaaggacccgacgctcatg
ctagacggcgagctctttgcgcccgagtgcaacttcgagcagctcaacgggcttgtacgt
cgactcaacaagaagtccgacccaaaaattatggaggcgcaggcgcgcctgctagagtac
ttcgcgttcgacatcatgtacagtgcgcagctctcgtccgtatcggctcctttcgacgag
cgctacatgctgctcaagaagctcatccccgtgtgcggcgcgaagcggattagcaactac
gttcacgacgacacgcggaagaaggtgatccgcgctacgcacggcggtgtggcgacagcg
gcagcggcaaacggtcaggccgtgaagatctaccatgtacctgccgcgcaggtgcacccg
agcgacatggaggacgtgctgaacgaggcgtgctcgcaggggtttgagggcgtcatgatc
cgccttcccaagttcccctacgagcacggcaagcgcagcttcgggctgctcaagtacaag
cagatgcacgacgctgagtttaagattgtcggcttcgtgcccggtgaaggcaagttcaag
agcgctcttggcgccttcgtctgcacaaccaaggacggcaaacacttcaacacgccaccc
aaggtctcctgcaagcaccgcatcgagctgtgggagcaccgtagggagtatctaggcaag
tacctgacggtgcagtatcaagagctctcctcgcagaacgtgccgcgcttccctatcgcc
aaggccattcgcggtagtgaggataagcgagattggctgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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