KEGG   Leclercia sp. LSNIH1: C2U54_10175
Entry
C2U54_10175       CDS       T05297                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
lei  Leclercia sp. LSNIH1
Pathway
lei03030  DNA replication
lei03430  Mismatch repair
lei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C2U54_10175
   03430 Mismatch repair
    C2U54_10175
   03440 Homologous recombination
    C2U54_10175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lei03032]
    C2U54_10175
   03400 DNA repair and recombination proteins [BR:lei03400]
    C2U54_10175
Enzymes [BR:lei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C2U54_10175
DNA replication proteins [BR:lei03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C2U54_10175
DNA repair and recombination proteins [BR:lei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C2U54_10175
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA RuvB_N AAA_22 AAA_5 AAA_18 ResIII AAA_2 DNA_pol3_delta AAA_30 AAA_14 AAA_assoc_2 PIF1 AAA_7 TsaE nSTAND3 Mg_chelatase AAA_16
Other DBs
NCBI-ProteinID: AUU84357
Position
2057128..2059056
AA seq 642 aa
MSYQVLARKWRPQTFADVVGQEHVLTALANSLSLGRIHHAWLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
TQIRDRLEYILNEEQVAHEPRALQLLARAADGSLRDALSLTDQAIASGEGKLTTQAVSTM
LGTLDDDQALSLIEAVVEANGERVMELVNASASRGVEWEALLVEMLSLLHRIAMVQLSPA
ALGPDMAAIEQRMRELARTIPPTDVQLYYQTLLIGRKELPFAPDRRMGVEMTLLRALAFH
PRMPLPEPEVQPQSFAPAAPTAVMSPQQVPVQPAAPSPQNVPLSDATSSVLAARSQLQRA
QGAPRPKKSEPAAPARARPVNNAALERLASVTDRVQSRSASVTSEPKAPVKQEAYRWKAT
TVTEEVKVEIATPKALKKALEHEKTPELSAKLAEESLVRDAWAAEVSKLKLPKLVEQVAL
NAWREQEGNRICLHLRPGQRHLNSASAQQVLSEALSTLQGAPVELTIIEDDNPAVRTPLE
WRQAIYEEKLAQAREAIIADNNIQTLQRYFDAELDEESIRPI
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgagttatcaggtgttagcccgtaaatggcgaccccaaacctttgctgacgttgtcggc
caggaacatgtgctgaccgccctggcgaacagcttatcgctaggacgtatccaccacgcc
tggcttttttccggcacccgtggcgtcggtaaaacctctattgcccgtttgctggcgaaa
ggccttaactgcgaaaccgggatcaccgccacgccgtgcggcgtgtgtgataactgccgt
gaaatcgagcaggggcgctttgtcgatctgattgagatcgatgccgcatcgcgcaccaaa
gtcgaagatacccgcgatctgctggataacgtccagtacgccccggcgcgtggccgcttc
aaggtctatctgatcgatgaagtgcacatgctgtcgcgccacagctttaacgccctgctg
aaaacgctggaagaaccgcctgcacacgttaaattcctgctggcgaccaccgatccgcaa
aagctgccggtcactatcttgtcccgctgtctgcagttccatctgaaggcgctggacgtc
acgcagatccgcgatcggctcgaatacatcctgaacgaagagcaggttgcccatgaaccg
cgggcgctgcagctgctggcgcgtgccgcagatggcagcctgcgcgatgcgctcagcctc
accgatcaggcgattgccagcggcgaaggcaagctgacgacccaggcggtgagcaccatg
ctcggcacgctggatgacgatcaggcgctgtcgctgattgaagcggttgtcgaggccaac
ggcgagcgggtgatggagctggtcaacgcctcagcctcacgcggcgtggagtgggaagcc
ctgctggtagagatgctcagcctgctgcaccggatcgcgatggtgcagctctccccggcg
gcgctgggcccggatatggcggccattgaacagcggatgcgcgagctggcccgcaccatt
ccgccaacggatgtacagctttactaccaaaccctgttaattggtcgtaaggaactgccg
ttcgcgcccgacagacgtatgggggttgagatgaccctgctgcgcgcgctggcgttccat
ccgcgcatgccgttgccggaacccgaggtgcagccacagtctttcgcaccggccgcgccg
acggcggttatgtcaccgcagcaggtgcctgtacagccggcagcgccatcgccgcaaaat
gtgccgctgtcggacgccaccagttcggtgcttgctgcccgcagccagctacagcgcgcg
cagggagcacccagaccaaaaaagagtgaaccggcagcgcctgcaagagcgcggccggta
aataacgccgcgcttgaacgtctggcttcggtcacggatcgtgtccagtcgcgttcggca
tcggtcacttctgagcctaaggcgccggttaagcaagaagcctatcgctggaaagccacc
accgtcaccgaagaggtgaaggtggagattgccacgccgaaggcgctgaaaaaggcgctg
gagcatgagaaaacgccggagctctccgcgaagcttgcggaagagtcgcttgtgcgcgat
gcctgggcagcagaggtcagtaaactgaagctgccgaagctggtggagcaggtcgcgctc
aacgcctggcgtgagcaggagggcaaccgcatctgcctgcatctgcgtccgggccagcgt
cacctgaactcggcgagcgcgcagcaggtgctgagtgaggcgctctccacattacagggc
gcgccggttgaattgactatcattgaagatgataatccggcggtccgtaccccgctggag
tggcgtcaggccatttatgaagagaagctcgcgcaggcgcgtgaggcgattatcgcggat
aataacattcagaccctgcagcgttacttcgatgcagaactggatgaagagagtattcga
cccatttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

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