KEGG   Leclercia sp. LSNIH1: C2U54_22305
Entry
C2U54_22305       CDS       T05297                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lei  Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:lei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lei03019]
    C2U54_22305
   03009 Ribosome biogenesis [BR:lei03009]
    C2U54_22305
   03036 Chromosome and associated proteins [BR:lei03036]
    C2U54_22305
Enzymes [BR:lei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     C2U54_22305
Messenger RNA biogenesis [BR:lei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C2U54_22305
Ribosome biogenesis [BR:lei03009]
 Eukaryotic type
  90S particles
   RNase
    C2U54_22305
 Prokaryotic type
  rRNA processing factors
   C2U54_22305
Chromosome and associated proteins [BR:lei03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     C2U54_22305
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AUU86570
Position
complement(4526720..4527400)
AA seq 226 aa
MNPIVINRLQRKLGYTFQHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKMLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttcagcatcag
gagttgttgcaacaggcattaacccatcgcagtgccagcagcaaacacaatgagcgactc
gaatttctgggtgactccattttaagttttgttattgcgaatgcgctttatcaccgtttc
ccgcgtgtggatgaaggcgatatgagccgcatgcgcgcaacgctggtacgtggcaatacg
cttgccgaaattgcccgtgaattcgaactgggtgaatgcctgcgactcgggcctggcgaa
ctgaaaagcggcggcttccgtcgtgaatctattctcgcggatacggtcgaagcgttaatc
ggtggtgttttcctcgacagcgatatccagacggtggagcagctgatcctgaactggtat
cagacgcgtctggatgagatcagcccgggtgataaacagaaagatccaaaaacccgtttg
caggagtatttgcagggtcgccatctgccgctgccatcttatctggtggtgcaggttcgt
ggcgaagcacacgatcaggagtttaccatccattgccaggtcagtggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggcggaacaggctgccgccgaacaggcgctg
aaaatgctggagctggaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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