KEGG   Lysobacter enzymogenes M497-1: LEN_3470
Entry
LEN_3470          CDS       T04598                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine13 synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
lem  Lysobacter enzymogenes M497-1
Brite
KEGG Orthology (KO) [BR:lem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lem03016]
    LEN_3470 (truD)
Enzymes [BR:lem01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     LEN_3470 (truD)
Transfer RNA biogenesis [BR:lem03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LEN_3470 (truD)
 Prokaryotic type
    LEN_3470 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: BAV98957
UniProt: A0A1J1ECY9
Position
complement(4294959..4296023)
AA seq 354 aa
MSGGDEAGLNELPRAHGAPALRARIRSAPEDFRVEELPSFAASGSGEHLLLTVEKRGMNT
AFAAKRLAQWAGVGEVAIGYAGLKDRHAVTVQRFSVHLPKRVAPDLALLESDELRVLEHH
WHAKKLPRGALAGNRFVLALREVEGERDRIEQRLQEISAHGVPNYFGEQRFGRDGDNVAN
ALAMFAGRRMRREQRSLLLSAARSELFNRVLAARVRDGSWSGLRDGVGLDGEVWSLAGSR
SVFGPEPWNEALAERLARCDIHPSGPLWGRGELRSADAVRALELDALQGEQALALRAGLE
AAGMDQERRALRLRAEQMQWRWLDDGALEVGFVLPAGAYATVVLAEIGRIDGAR
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgagcggcggcgacgaagcgggcctgaacgagctgccgcgcgcgcacggcgcgccggcg
ctgcgcgcgcgcatccgcagcgcgcccgaggatttccgggtcgaggagctgccctcgttc
gccgccagcggcagcggcgagcacttgctgctgaccgtggaaaagcgcggcatgaacacc
gccttcgccgccaagcggctggcgcagtgggccggggtgggcgaggtcgcgatcggctac
gccgggctcaaggaccgccacgcggtgaccgtgcagcgcttcagcgtgcacctgcccaag
cgggtggcgccggatctggcgttgctggaaagcgacgagctgcgcgtgctcgaacaccac
tggcacgcgaagaagctgccgcgcggcgcgctggccggcaaccgtttcgtgctggctttg
cgcgaagtggaaggcgagcgcgatcggatcgagcaacgcctgcaggaaatctccgcgcac
ggcgtgcccaactatttcggcgaacagcgcttcggccgcgacggcgacaacgtcgccaac
gcgctggcgatgttcgccggccgccgcatgcgccgcgagcagcgcagcctgctgctgtcg
gcggcgcgctcggaactgttcaaccgcgtcctggccgcgcgcgtgcgcgacggcagctgg
agcgggctgcgcgacggcgtcgggctcgacggcgaggtgtggtcgctggccggcagccgc
agcgtgttcgggccggagccgtggaacgaggcgctggccgagcgcctggcgcgttgcgac
atccatcccagcggcccgctgtggggccgcggcgagttgcgcagcgccgatgcggtgcgc
gcgctggaactcgacgcgctgcagggcgagcaggcgctggcgttgcgcgccgggctggaa
gcggccggcatggaccaggagcgccgcgcgctgcggctgcgcgccgagcagatgcaatgg
cgctggctcgacgacggcgcgctggaagtcggcttcgtgctgccggccggcgcttacgcc
accgtggtgctggccgaaatcggccggatcgacggcgcgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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