KEGG   Lysobacter enzymogenes M497-1: LEN_3585
Entry
LEN_3585          CDS       T04598                                 
Symbol
alkA
Name
(GenBank) AraC family transcriptional regulator, regulatory protein of adaptative response/DNA-3-methyladenine glycosylase II
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
lem  Lysobacter enzymogenes M497-1
Pathway
lem03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LEN_3585 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lem03000]
    LEN_3585 (alkA)
   03400 DNA repair and recombination proteins [BR:lem03400]
    LEN_3585 (alkA)
Enzymes [BR:lem01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     LEN_3585 (alkA)
Transcription factors [BR:lem03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    LEN_3585 (alkA)
DNA repair and recombination proteins [BR:lem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LEN_3585 (alkA)
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HhH-GPD HTH_AraC
Other DBs
NCBI-ProteinID: BAV99072
UniProt: A0A1J1EMZ6
Position
4421640..4423220
AA seq 526 aa
MDAPALPAPDPSLPPPQVCEQARISRDPRFDGLFFVAVTSTGIYCRPVCPAPTAKSANVK
YFGHAAACEAGGFRPCLRCRPELSPAEGAWRRGDAAVARALKLIDEGALADGPLSALAER
VGLGERQLRRLFVERLGAPPIGVHGTRRLLFAKQLLTETRLPITQVALAAGFGSLRRFNA
VFLEAYRMAPRDLRRRPNESPASEGDGDALVLRLGYRPPYDLSAMLDFLRGRALPGVEHV
DERSYSRAIGPIDAPGWLRVSAWPSDQRGRQHALKLELHGAAPARLLEITNRLRRMFDLD
ADPNAIGAALSVDPRLRELVVRRPGLRLPSGWDGFEISVRAILGQQVSVAAARTLAARVA
QRFGQALPQPFGPGLTHLFPTPVELADADLAEIGLTRARADTVRTVARALLDGRVDFRAE
RTLDDFVARWVALPGIGPWTAHYIAMRALGHPDAFPADDLVLQKALPEDGVRLSAKALNA
RAEAWRPWRAYGVIHTWRDSMPAPVALKTPARAAAAGKDKKARKAA
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggacgcccccgccctccccgctcccgatccctcgctgccgccgccgcaggtgtgcgag
caggcgcgcatcagccgcgatccgcgcttcgacggtttgttcttcgtcgccgtcaccagc
accggcatctattgccggccggtgtgtccggcgccgaccgccaaaagcgccaacgtcaaa
tacttcggccacgccgcggcctgcgaagccggcggtttccgtccgtgcctgcgctgccgc
cccgagctgtcgccggccgaaggcgcgtggcggcgcggcgacgcggcggtggcgcgcgcg
ctcaagctgatcgacgagggcgcgctcgccgacggcccgctgtcggcgctggccgaacgc
gtcggcctgggcgagcggcaactgcgccggctgttcgtcgaacgcctcggcgcgccgccg
atcggcgtgcacggcacgcgccggctgctgttcgccaagcagttgctgaccgaaacccga
ctgccgatcacccaggtcgcgcttgccgccggtttcggcagcctgcgccgtttcaacgcg
gtgttcctggaggcctaccgcatggccccgcgcgatctgcgccggcgtccgaacgagtcg
cccgcgagcgaaggcgacggcgacgcgctggtgctgcgcctgggctatcgcccgccgtac
gacctgagcgcgatgctcgatttcctgcgcggccgcgccctgcccggcgtcgaacacgtc
gacgagcgcagttacagccgcgcgatcggccctatcgacgcgccgggctggctgcgggtg
agcgcgtggccgtcggaccagcgcggccgccagcacgcgctgaaactggaactgcacggc
gccgcgccggcgcggttgctggaaatcaccaaccgcctgcgccgcatgttcgatctcgac
gccgatccaaacgccatcggcgcggcgctgtcggtggatccgcgcctgcgcgagctggtg
gtcaggcgccccggcctgcgcctgcccagcggctgggacggtttcgagatttcggtgcgc
gcgatcctcggccagcaagtcagcgttgccgccgcgcgcacgctggccgcgcgcgtggcc
cagcgtttcggccaggccttgccgcagccgttcgggccggggctgacccatctgttcccc
acgccggtcgagctggccgacgccgatctggccgaaatcggcctgacccgcgcccgcgcc
gacaccgtgcgcactgtcgcccgcgccctgctcgacggccgcgtcgacttccgcgccgag
cgcaccctcgacgacttcgtcgcgcgctgggtcgcgctgccgggcatcggcccgtggacc
gcgcactacatcgcgatgcgcgcgctcggccatcccgacgccttcccggccgacgatctg
gtcctgcaaaaagccctgcccgaagacggcgtgcgcctgagcgccaaagcgctgaacgcg
cgcgccgaagcgtggcggccgtggcgcgcctacggcgtgatccacacctggcgcgacagc
atgccggcgccggtggcgttgaaaacgccggcgcgcgccgcggccgccggcaaagacaag
aaagcgaggaaggccgcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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