KEGG T04044: AMK43

Leptotrichia sp. oral taxon 212: AMK43_00035

Entry

AMK43_00035       CDS       T04044

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

leo Leptotrichia sp. oral taxon 212

Brite

KEGG Orthology (KO) [BR:leo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:leo03032]
    AMK43_00035 (gyrB)
   03400 DNA repair and recombination proteins [BR:leo03400]
    AMK43_00035 (gyrB)
Enzymes [BR:leo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AMK43_00035 (gyrB)
DNA replication proteins [BR:leo03032]
Prokaryotic type
  DNA Topoisomerases
   AMK43_00035 (gyrB)
DNA repair and recombination proteins [BR:leo03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AMK43_00035 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C

Other DBs

NCBI-ProteinID:

ALA94654

UniProt:

A0A0K2J7V8

Position

4234..6216

AA seq 660 aa
MSNNYGAEDIRVLEGLEAVRVRPGMYIGSTSSKGLHHLVWEVVDNSVDEALAGICDNISV
KILPDNVIEVMDNGRGIPIGMHETGKSTLEVVMTVLHAGGKFDNDNYKVSGGLHGVGISV
VNALSEWVEATVTRDGKTVRQTFKRGIPVSDPVQIAEAPEDKHGTVIRFRADDEIFETTV
YDYSVLESRLKELAYLNKGLKITLSDERNSENIKSEEFLFEGGIKDFLNEITDEEKISDE
IIYMSDTYKIQEEEDIETTDSEGNTVKKHKSAKFVEVEIAMAYTVSQKENVYSFVNNINT
YEGGTHVSGFRTALTRTINDIAKQMNIIKEKDGSFQGSDVREGLFCVISVKIPEPQFEGQ
TKTKLGNSEVTGIVSNIVGNNLKVYLEDHPKEAEKIIEKMSMSKKAREAAKKARELVLRK
NSLEVGSLPGKLADCSSKDPSESEIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEK
SGINRALENAEIRAMITAFGAGFGEEMDISKLRYHKIVIMTDADVDGAHIRTLMLTFFYR
HLRELINEGYIYIAQPPLYKIQSGKAIKYAYSDDQLKQVTKSLENENRKYTIQRYKGLGE
MNPEQLWETTLDPEVRTLLKVSMEDASYADKMFNILMGDKVEPRRQFIEENANYVRNLDI

NT seq 1983 nt +upstreamnt +downstreamnt
atgtctaataattatggagccgaggatataagggtactggaaggactggaagctgtaagg
gtaagaccgggaatgtacataggatcaacttcttcaaaaggacttcatcaccttgtatgg
gaggtagtggataacagtgtcgatgaggctctggctggaatatgcgacaacatatctgta
aaaatattacctgataatgttatagaagttatggataatggaagaggaatacctatagga
atgcatgaaacaggaaaatcaacgcttgaagttgtaatgactgtacttcacgcaggagga
aaatttgacaatgacaactataaagtatcaggaggacttcacggagtaggaatttcagtc
gtaaatgccctctctgaatgggtggaggctacagttacaagagatggaaagacagtaaga
cagacgtttaaaagagggatacctgtaagtgatcctgtccagatagctgaagctccggaa
gataagcatggaacagttataagatttagggctgatgatgaaatatttgaaacgacagtt
tatgattattctgtccttgaatccagactgaaagagcttgcctatctaaataaagggctt
aaaataacactttctgacgaaagaaacagtgaaaatataaaatctgaggaatttctgttt
gagggaggtataaaagacttcctgaatgaaataacagatgaggaaaaaatttcagatgaa
ataatatatatgagcgatacatataaaattcaggaagaagaagacattgaaacaactgat
tctgagggaaatactgtaaaaaaacataaatctgctaaatttgtagaagtggaaattgcg
atggcatatacagtatcccagaaggaaaatgtatattcctttgtaaataacataaataca
tatgaaggcggaactcatgtaagtggattcaggacagcacttacaaggactataaatgac
attgcgaagcagatgaatattataaaggaaaaagatggatcttttcagggttctgatgta
agggaagggcttttctgcgtaataagtgtaaaaatacctgaacctcagtttgaaggacag
acaaagactaagcttgggaacagtgaagtgactggaatagtttcaaatattgtgggaaat
aaccttaaagtctatcttgaagaccatccgaaggaagcagaaaaaataattgaaaaaatg
tcaatgtcaaaaaaggcaagggaagcggcaaaaaaagccagggaacttgtactcagaaaa
aacagccttgaagtgggatcgttacctggaaagcttgccgactgttcttcaaaggatcct
tccgagtcggaaatattcatagttgaagggaactctgcgggaggttctgcaaagcaggga
agagacagaagatttcaggcgatactgcctctgaggggaaaaatactgaatgtagaaaaa
tcaggaataaacagggcactggaaaatgcagaaataagagcgatgataacagcattcggg
gcaggattcggagaagaaatggatatttccaaactgagatatcataaaatagtaataatg
acggatgccgatgtggatggagcacacataagaacccttatgctgacattcttttacaga
catctgagagagcttataaatgaaggatatatatacatagcgcagccgcctttatataaa
attcagtcaggaaaggcaataaaatatgcatattctgatgatcagcttaagcaggttaca
aaatcacttgaaaatgaaaatagaaaatatacaattcagagatataaagggcttggagaa
atgaatcctgaacagctgtgggaaacaacacttgatcctgaggtaagaacgcttctgaaa
gtttcaatggaagatgcttcgtatgccgacaagatgtttaacatacttatgggggacaag
gtggaacctaggagacagtttattgaggaaaatgcaaattatgtaagaaatctggatata
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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