KEGG   Leptospirillum ferrooxidans: LFE_2353Help
Entry
LFE_2353          CDS       T01809                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lfc  Leptospirillum ferrooxidans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lfc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LFE_2353
Enzymes [BR:lfc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LFE_2353
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LFE_2353
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2430148..2431023
Genome map
AA seq 291 aa AA seqDB search
MPELPEAETIRKQLLPVLLGSRVRSLRSGPYPKIFLSDIPDLSGWQFSDLGRIGKVLLFS
MKSPAGESGTLLTRLGMSGQWNISGNRQDSQLPLQPSQTTIHTHLAITLETPEGERLLSY
RDPRRFGRVEWQTDIALSGILQTTGPDILKIRAEQFEHSIRASRRSIRTILLDQKIASGI
GNIYVSEILFESGIHPDRKGFRITGAEARRILESSAVVLQKAIDRGGSSIHSFKDAFGEE
GGNQSQLQVYGLDGSPCPLCKSPILKKEEGGRSSYFCLRCQPKKRTSPARS
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgccagaacttccagaagccgaaacaatccgcaaacaacttcttcccgttcttttggga
tcccgtgtgcgctctctccggagcggcccttatccaaaaatcttcctgtccgacataccg
gatctttcgggatggcaattttccgacttgggccgcatcgggaaagttcttcttttctcc
atgaaatctcctgccggtgagtccgggacgctcctgaccagactcggcatgtcggggcaa
tggaacatatccggtaacaggcaggattcccaactccccctccaaccctcccaaacaacc
attcatacccatctggccatcactcttgagacccccgaaggcgagaggctcctgtcttac
cgggatccccgacgtttcggacgagtcgagtggcaaaccgacatagctctttccgggatc
cttcaaacgaccggccccgatattctcaaaatccgggccgaacagtttgaacacagtatc
cgggcttcccggcgttcgatccggacgattctcctcgaccagaagatcgcgagtgggatc
gggaatatctatgtctcggaaattctttttgaatccgggatccacccggaccggaaaggc
ttccggataacaggggccgaggcgcgccgcatcctcgaatcttccgcagttgtcctccag
aaagccatcgatcgtggaggaagctctatccacagctttaaggacgccttcggagaagaa
ggggggaaccagagccagctgcaggtgtatggactcgatggatcaccttgtccactctgc
aagagtccgattctcaaaaaagaggagggaggccgatccagttatttttgcctgcgttgc
cagcccaaaaaaagaacatcccccgccaggtcctga

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