KEGG   Limosilactobacillus fermentum IFO 3956: LAF_1210
Entry
LAF_1210          CDS       T00699                                 
Name
(GenBank) conserved hypothetical protein
  KO
K07464  CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfe02048]
    LAF_1210
Enzymes [BR:lfe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.12  Exodeoxyribonucleases producing 3'-phosphomonoesters
    3.1.12.1  5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
     LAF_1210
Prokaryotic defense system [BR:lfe02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    LAF_1210
   Subtype I-B factors
    LAF_1210
   Subtype I-C factors
    LAF_1210
   Subtype I-D factors
    LAF_1210
  Type II CRISPR-Cas system
   Subtype II-B factors
    LAF_1210
SSDB
Motif
Pfam: Cas_Cas4 PDDEXK_1
Other DBs
NCBI-ProteinID: BAG27546
UniProt: B2GD14
Position
complement(1395220..1395876)
AA seq 218 aa
MAYDNDDILQISGIQHFIFCRRQWALAYLENSWVENYLTLTGDELHKKVDNPFIKESRNA
KFIERAMRINSRRLGLSGICDVVEFIENPDGVRIFGKSGEYLPIPVEYKRGKQKSDHSDE
LQLLAEAVCLEEMLYCHLDYGYLYYGQTKHRERVEFSKELRDELNKAVAEMHRYWEKKYT
PRVKPSKKCRSCSLKDICLPELLKTEKVSDYIKRRLEG
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcttatgataatgatgatatattacagatttctggaattcagcactttatcttttgt
aggcgtcagtgggcccttgcatatttagagaatagttgggtggaaaattacctcacattg
accggagatgagcttcacaaaaaagtagataatccgttcatcaaagagagtcgtaatgcc
aaatttattgaaagagcaatgcggattaactctcggcgactagggttatctgggatttgt
gatgtcgttgaattcattgaaaacccagatggggtgagaatatttggtaaatcgggtgag
tatcttcccatcccggtggaatataaaagaggcaaacagaagagtgaccattctgatgag
ctacaattactagcagaggcggtttgtcttgaagaaatgctttactgtcatcttgattac
ggttacctctactatggacaaaccaagcaccgagaaagagttgaattttcaaaagaactt
agagatgaacttaacaaagctgtagctgagatgcaccgttactgggagaaaaaatatact
ccacgcgtaaaacctagcaaaaaatgccgatcttgttcactaaaagatatttgcttacct
gagctcctaaagacagagaaggtatcggactacattaaacggaggcttgaaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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