KEGG   Leptospirillum ferriphilum ML-04: LFML04_1056
Entry
LFML04_1056       CDS       T02319                                 
Name
(GenBank) putative transcription elongation factor/transcription termination factor (NusA)
  KO
K02600  transcription termination/antitermination protein NusA
Organism
lfi  Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:lfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lfi03021]
    LFML04_1056
   03009 Ribosome biogenesis [BR:lfi03009]
    LFML04_1056
Transcription machinery [BR:lfi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     LFML04_1056
Ribosome biogenesis [BR:lfi03009]
 Prokaryotic type
  rRNA transcription factors
   LFML04_1056
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 HHH_2 IMS_HHH KH_2 Cdd1 DUF5801 DUF4332 5_3_exonuc MRP-S35
Other DBs
NCBI-ProteinID: AFS53286
UniProt: J9ZAY5
Position
996589..997947
AA seq 452 aa
MVNQELLSVIDQLHREKGISQETLIVALESALLAAARKRYGGGDNFQVEINPRTGEVQVL
QIRRIVERVESPSEEISLAEALESDPEAEVGDEIGSYLEIDDFGRIAAQAAKQVMFQKVR
EAEWDVVTKEFGGRQGDIVNGVIIGHERKNYIVDLGKTEAVLPLREQMPRESFRRGDRIK
ALLLDMRTTSRGPQLVLSRTHPDFVSRLFEKEVPEIAEGILEVRNVVREPGERAKIAVYS
RDPNVDPVGSCVGVKGVRVQAVVRELHGEKVDIIEWNSDPATFIARALSPAKAVRVSIKD
MGSEKVATVVVQDSQLSLAIGRRGHNVRLAAKLTGWKVDIFSETQMQSEAGLDERAERVA
SLAETLGSQSGDTSLLRIEDLPGVGGNMAEILRDAGFDTLQAIAHASVEAISALPKFGPK
TAAKLIQTAQDFLGESSGETPGLMELPKTDET
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggtgaatcaagaacttttaagcgtaatcgatcaacttcatcgggaaaaagggatttct
caggagactcttattgtcgccctcgaatcggctctgcttgccgcagcacgcaagagatac
ggtggaggggacaattttcaggtggaaatcaacccaaggactggtgaagtgcaggttctc
caaatccggcgaatcgttgagcgggtggagagtccttctgaagaaatttctctcgccgaa
gccctggagtcggaccctgaagcagaggtgggcgatgaaatcggttcctacctggaaatt
gatgattttgggagaattgcggcccaggcagcgaagcaggtgatgttccagaaggttcga
gaggcggagtgggatgtcgtcaccaaggaattcggtggtcgccagggggatatcgtcaac
ggggtaatcatcggtcatgaaagaaaaaactacatcgtcgacttggggaaaacggaagcc
gttctcccgcttcgggagcagatgccgcgtgaaagttttcgcagaggagaccggatcaag
gcacttctgctcgatatgagaaccacgagtcgcggtcctcagcttgtgttgtccagaacg
cacccggatttcgtttcccgtctctttgaaaaagaagttccggaaattgcagaaggaatt
ctggaagttcgaaacgttgtccgtgaacccggggaacgagcaaaaattgcggtctattcc
cgtgatcccaatgttgatccggtgggttcctgtgtaggggtgaagggtgttcgggttcag
gcggttgtccgtgaacttcatggagaaaaagtcgatatcatcgaatggaattcggacccc
gctacttttattgcccgggccttgagtccggcaaaggcggtcagggtttccataaaggat
atggggtctgaaaaggtcgcgaccgtggttgttcaggactcccagctttcgttggctatc
ggaagacgcggacataatgttcgccttgcagcaaaactgactggctggaaagtcgatatt
tttagtgaaacccagatgcagtccgaggcaggattagatgaacgggctgagagggtcgcc
tcactcgcagaaacacttggctcgcaaagcggcgatacaagccttcttcgtatcgaagat
ctgccgggtgttggtggtaatatggctgaaatactgcgggatgccggctttgatacgctt
caggccattgcccatgcttccgtcgaagctatttccgcgctgccgaagtttggccccaag
acggcagcgaaattaatacaaacggcccaggattttttgggtgagtccagtggagagact
cctggtctcatggaacttccaaaaacggatgaaacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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