KEGG T02319: LFML04

Leptospirillum ferriphilum: LFML04_1887

Entry

LFML04_1887 CDS T02319

Definition

DNA ligase

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

lfi Leptospirillum ferriphilum

Pathway

lfi03030	DNA replication
lfi03410	Base excision repair
lfi03420	Nucleotide excision repair
lfi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:lfi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:lfi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:lfi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:lfi03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

410479410

NCBI-GeneID:

13687962

UniProt:

J9ZEK1

Position

1792721..1794529

AA seq 602 aa
MATSIDRICDCLHVLESLTGRIEMAQEMGSFLGILENPERAPFIYLVQGQLAPPFRGGET
GMSTKLVLRAIGLAVEKAEIPLTSSPEKKLEELGDMGNLVEHLFSGRQGESLPFLDVFQT
LENLALRGGEGSQEEKIRELATLFLKISPLSSRFVARFVVGKLRLGVGDATIIDALAHWQ
GGKSAKSPIENGYNLCSDLGRIATLLGSEGLDAVRQLRPSPGFPIRMALCERLSSGEDIF
EKIGPCAVESKYDGFRCQVHTDGTNIQIFSRNLEETTAMFPEIVEGTRALFGERTAIFEG
EALGYNAETGGYHPFQVTITRKRKHNVKQKSDEVPLKMLVFDLMYLDGESWLDVPFLERR
HKMESLFPTRMFSVEEEELAPSGVFGTSRLIMADHPSTIDLFFDEVLEEGFEGIIAKRKE
GTYTAGSRNFNWIKLKRSYKDALSDTLDLVIIGFYRGKGQRTRLGIGAILTAAYDREQDK
FVSIARIGSGLTEAQWITLREMLEESTLPERPPSVLSDIQPEYWVEPKFVVRVRADDITR
SPQHMCGRREGEEGYALRFPRMTGEPRADKNPFDATTVLEIKNLYQKQKNLLVRHRPTSG
DT

NT seq 1809 nt +upstreamnt +downstreamnt
ttggcgacttccattgacaggatatgcgactgccttcatgttctggaaagtctgaccggt
cgcatcgaaatggcgcaagagatgggctcttttcttggaatcctcgagaatcccgaaaga
gcgccctttatctacctggtacagggccagctcgctccgccttttcggggtggagagacc
ggaatgtcgacaaaactggttctccgtgccatcggtctcgccgtggaaaaggcggagatc
ccgctgacctcctccccggaaaaaaaactcgaagagctgggagacatgggaaatcttgtg
gagcacctgttttcgggaagacagggagaatcccttcccttcctggatgtttttcagact
ctggaaaacctggccctgcgcggaggagaaggctctcaggaagaaaagatccgggaactc
gcgaccctttttctcaagatctccccgctgtcctcccgctttgtggcgcggtttgttgtc
ggcaagcttcgactcggggtgggggatgccaccattatcgacgccctcgcccactggcaa
gggggcaaatccgcgaaatcaccgatcgagaacggatataacctctgttcagacctggga
cggatcgcgacgcttcttggctcggaaggactcgatgccgtccggcaactccgcccgtct
ccgggatttcccatccggatggccctctgcgaacggctgtcttccggagaagacattttt
gagaagatcggcccctgtgcggtcgaaagcaaatatgacggatttcgttgccaggtccat
acggacggcaccaacattcaaatcttttcccgaaacctcgaagaaaccacggcgatgttt
cccgaaattgtcgagggtacccgcgcgctttttggagagcggacggcgatctttgaagga
gaggcccttggatacaacgccgaaacgggcgggtaccatccgttccaggtgaccatcaca
cggaagcgaaaacacaacgtcaagcaaaagtccgatgaagtgccgctcaagatgctcgtg
ttcgacctgatgtatctggacggagaaagctggctcgacgtcccttttctcgaacgccgg
cacaagatggaatccctttttccgacgagaatgttttccgtcgaggaggaagaattagcc
ccgtcgggtgtgtttggcacctcccgtctgatcatggcggaccatccgtcgacaatcgat
ctgtttttcgatgaggttcttgaagaggggttcgaagggattatcgcaaaaagaaaggag
ggaacctacacggcaggttcccggaacttcaactggatcaagctcaaaagaagttacaag
gatgctctttccgatacgctcgatctggtcatcatcgggttttaccgggggaaggggcag
aggacccggctgggaatcggcgccatcctgaccgcggcctacgacagggagcaggacaag
tttgtctccattgcacgcatcgggtccggtctcacggaagcccagtggatcacgcttcgg
gagatgctggaggaatccacccttcccgaaagacccccctcggtcctgagcgatatccag
ccggaatactgggttgaacccaagtttgtggtccgtgtccgggcggatgatatcacccgc
tccccccagcacatgtgcggacgtcgggaaggggaagaaggatacgccctgcgcttcccc
cggatgaccggagaaccccgggcggacaagaaccctttcgatgcgacgaccgttctggaa
attaaaaatctttaccagaagcagaaaaatcttctcgttcgccaccgcccgacatccggt
gacacttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system