KEGG   Leptospirillum ferriphilum: LFML04_2438Help
Entry
LFML04_2438       CDS       T02319                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lfi  Leptospirillum ferriphilum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lfi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LFML04_2438
Enzymes [BR:lfi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LFML04_2438
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LFML04_2438
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2318763..2319770
Genome map
AA seq 335 aa AA seqDB search
MEFRSAKSFLHAFPLRLLQVASGAYTTDNEKERRELLYLQDEKRMPELPEAEAIRLPVLR
FFSDGVVESIRRGSNKNIWIGEEEYRLGELFLFNVRRTGKVLIFDWRTTKEKTAVLLISR
LGMSGTWLIQHLREPLPDHCHLVISFKNLAHRLVYRDPRRFGRLEWTFEEESSVILASQG
PDILKIPADEWHRQARKSSRTIRSLLLDQKISSGIGNIYASEILFAAGLSPFRTGKSLSK
RESYRILDAAREILEAAIRSGGSTIHSFQTSLGEDGRYQDRHIVYGRAGKPCPHCSTPIQ
SVKEASRTLFYCPFCQKRQLRTKENMLREALTTVQ
NT seq 1008 nt NT seq  +upstreamnt  +downstreamnt
atggaatttaggagtgcaaaatcctttctgcatgcctttcctttaagacttctgcaggtt
gcatcaggagcatatacgacggataatgaaaaggaacgcagggaactcctctatcttcag
gatgaaaaacgcatgccagaacttccggaagcagaagcaatcagactcccggtattacgt
ttcttctcggatggtgtcgtagagtccatcaggagagggagtaacaaaaacatatggatt
ggagaggaggagtaccggttaggggaactgtttcttttcaatgtcagaagaacgggtaaa
gttctgattttcgactggagaaccaccaaagaaaagactgccgtccttttgatcagccgt
ctcggaatgtctggaacatggcttatacaacatcttcgggaacctctccctgatcattgc
catcttgtcatatcgtttaagaatttagcccaccgtcttgtttacagggatcccagaaga
tttggaaggcttgaatggactttcgaggaagagtcttctgttattctcgcctcacagggt
ccggacatattgaagattcctgcagatgagtggcacaggcaggctcgaaaatcctccaga
accatccggtcacttcttctggaccaaaaaatctcgtccggcatagggaatatctacgct
tctgaaattcttttcgcagcaggcctatcaccattcagaacaggaaaaagcctttcaaag
agggaatcctatcggatccttgacgcagccagggagattcttgaagcggccattcgaagc
ggtggatccacaattcacagttttcagacaagtcttggagaagatggtcgctatcaagac
agacacatcgtgtatggaagggcaggaaaaccctgcccccactgcagcacccctattcag
tccgtcaaggaagcatcccggaccctgttttattgccccttttgccagaaacggcaactc
cggacgaaggagaacatgctccgggaagctttgacaacagtccaatga

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