KEGG   Limosilactobacillus fermentum CECT 5716: LC40_0228
Entry
LC40_0228         CDS       T01958                                 
Name
(GenBank) Biotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
lfr  Limosilactobacillus fermentum CECT 5716
Pathway
lfr00780  Biotin metabolism
lfr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lfr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    LC40_0228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lfr03000]
    LC40_0228
Enzymes [BR:lfr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     LC40_0228
Transcription factors [BR:lfr03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    LC40_0228
SSDB
Motif
Pfam: HTH_11 BPL_C BPL_LplA_LipB HTH_Crp_2 HTH_36 GntR HTH_24 MarR_2 HTH_54 HTH_10 TrmB HTH_23 HTH_6 HTH_CodY
Other DBs
NCBI-ProteinID: ADJ40878
Position
389800..390762
AA seq 320 aa
MATKERLLAHLLSAPNQWFSGQSLADQLGVSRESVWKAIRSLQQAGYQIDSDRKRGYCYR
GTAKMLAPVIELGLGTTKVKLVVEEELESTQTTARQLLATGDSTAPLVVIADHQIGAYGR
RGRAFYAPKATGLYMTIGVPNVTFPGQPGLLTTGVAVTVATVLKRFFPAQRLSYKWVNDL
YLGHQKVVGILTEMQTDLEATSQTSLVIGIGINLTTKEFPADLKEKVTGIDPAATVDRNR
LAAELIEAVLSDLPDYSQGIFLPEYRAHSLILGRSVSLQIGQTTFSGIAQNIDDQGQLVV
RAPNGQLRTFSSGEVTKVNF
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcgaccaaagaacggctattagcccacttactttcagcgccaaaccagtggttttcc
ggtcagagcctagccgaccaattaggcgttagccgggagtcggtttggaaggcaattcgt
tccctccaacaggccggctaccaaattgattcggaccgcaaacggggttattgttaccgg
gggactgctaaaatgttggcacccgtaattgaactgggcctaggcaccacgaaggtaaaa
ctagtggtggaagaggaactcgaatcaacccaaaccacggcccggcaactactagcaacg
ggagattcgaccgcccccctcgttgtgattgctgaccaccaaatcggggcctacgggagg
cggggccgggccttttatgccccgaaagccacgggcctttatatgacgattggggttcca
aacgttacctttcctgggcaaccaggcttgttaacgaccggagtggccgtaacggtggca
accgtcttaaaacggtttttccccgcccaaagactgagttacaagtgggtcaatgacctg
tacttgggacaccaaaaggtagtggggattttaacggaaatgcaaaccgacctggaagcc
actagccagacctctttggtaattgggattggcattaacttgaccactaaggaatttccg
gctgacttaaaagaaaaggtaaccggaattgacccggcggccacggttgatcgtaaccgt
ctagctgcggagttgatcgaagcagtcctaagcgacctccccgactattcccaagggatc
tttttaccggagtaccgggcacactccctgattttggggcggtcggtaagccttcaaatt
gggcaaacgacctttagcggaatcgcccaaaacattgatgaccaaggccaactagtggtt
agggcgcctaatggtcagctaagaaccttctcttccggggaggttactaaggtcaacttc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system