KEGG   Lactobacillus gasseri ATCC 33323: LGAS_1420Help
Entry
LGAS_1420         CDS       T00410                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lga  Lactobacillus gasseri ATCC 33323
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lga00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LGAS_1420
Enzymes [BR:lga01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LGAS_1420
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LGAS_1420
DNA repair and recombination proteins [BR:lga03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LGAS_1420
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(1411956..1412786)
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL
LFRFNDDLTMVSHLRMEGKYHLVSPDTPKGKHEHVEFIFTDGTALRYDDVRKFGRMHLVE
TGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGLGNIYVDEVL
WKSKIHPLSSAKAIPADKVKNLYQNINHTIAIATKERGTTVHTYLDANGEIGGYQKMLQV
YGHAGEECSSCGTILEKIKVNGRGTTFCPHCQVLYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccagagatgccagaagttgagacggttagacgcactttaactcctctagtaaaggga
aagacaattgccaagattaatatttggtatcctaaaattatagttaatgatccagctgaa
tttgttaaaaaattgacaaataaaaggatcttaaaaattgatcgttatggcaagtattta
ctctttagattcaatgatgacttaacaatggtttcgcatttgcgcatggaaggaaaatat
catttagttagtcctgatacacctaagggaaagcatgaacatgtagaatttatttttact
gatggaactgccttacgttatgatgatgtgcgaaaattcggtaggatgcatttagttgaa
acggggactgaaagaaaaacgactggaattcgccatcttggacctgaacctaatactgct
gaatttaacttaaagtattttgttgatgccttgagccagaagaaaaagaatatcaagaac
actttattagatcagacaattgtgtgtggtttaggaaatatttatgtagatgaagtgctc
tggaagagtaaaattcatcccctaagtagtgctaaagctattcctgctgataaggtgaag
aatttatatcaaaatattaaccatactatcgctatagcaactaaggaacgtggaactact
gttcatacttatttagatgctaatggtgagattggtggctatcaaaaaatgctgcaagtt
tatggacatgctggtgaagagtgcagtagttgcggcactattttagagaagatcaaagta
aatggacgcggaactactttctgtccgcattgtcaggtactatataaatga

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