KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_156651
Entry
LOTGIDRAFT_156651 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
lgi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_156651
   03015 mRNA surveillance pathway
    LOTGIDRAFT_156651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_156651
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LOTGIDRAFT_156651
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 20237053
NCBI-ProteinID: XP_009045525
JGI: 156651
UniProt: V4B170
Position
Unknown
AA seq 401 aa
MFILIFMKLCDIIEGCGPLQRVEVSKQAKSDSETVGAGSKEQQKKTGSPDKPERGRPKQK
RAGSSSSGSSSIVPDSSFISMTYSGSSESMDFSPNRDGDFSSDSWSSMEDGESTDYSSDF
SSDKDFNDSDGNDPEQEVLTENTVIGADMVTFTGNQHQVDGVQFHALLDQLTGIMVFHSV
KIPIVLDPEAVPDLRQVEVVALVPVVLVALGQEVQGRVAHHPVTVHAAEKGNGDKNLGFS
PKRRKRSPTPKPSKVHIGHLTRNVNKDHIVEIFSTYGAIRNVEMMIDRLHPNFNRGFAYV
EYEKSEDAEKAIKFMDGGQIDGQEVSAAAILQQRPPPRYPMRRSPPHHRRGPPPRWHNSP
PRFRRRSPPPRRRSPPPRRRTRSRSPARRRRYSRSSSSSSR
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtttatcttgatctttatgaaattgtgtgatattatagaaggatgtggccctcttcag
agggttgaagtcagtaagcaggcaaaatctgattcagagactgtaggggctggtagtaaa
gaacaacagaaaaagactggtagtccagacaaacctgaacgaggaagacctaaacagaaa
agagcaggttcatcaagtagtggtagtagctcgattgtgcctgattcttcttttatatcc
atgacatatagtggaagttctgaaagcatggatttttctcccaacagagatggagatttt
tcttctgacagctggtcaagtatggaagacggtgaaagtactgattattcttcagatttt
tcctcagataaggatttcaatgacagtgatggaaatgatccagaacaagaagtccttaca
gaaaatactgtaataggagcagatatggtcacttttacagggaaccaacatcaagtggat
ggagttcaattccacgctcttctggaccaattaactggtataatggtatttcattctgtg
aaaattcctatcgttttagatccagaagccgttccagatcttcgtcaagtggaagtagta
gctctagtaccagtagttctggtagctctgggtcaagaagttcaaggtcgagtagctcat
catccagtaacagttcacgcagcagagaaaggaaacggagacaaaaatctgggtttctct
cctaaaagaagaaagagaagcccaactcctaaaccaagtaaagttcacattggacatttg
acacgtaatgtaaataaagaccatattgtagagatattctctacctatggagctattaga
aatgttgagatgatgatagataggctacatccaaatttcaatcgaggatttgcttatgtt
gaatatgagaaaagtgaagatgctgaaaaagccatcaaatttatggatggaggtcagata
gatggtcaggaagtatcagcagcagctatattacaacagagacctccacctcgataccca
atgagaagaagtccacctcatcatcgccgtggtccacctccaagatggcataattcacct
cctagatttaggagaagatcaccaccaccaaggagacgttctcctccgccaagacggaga
accagatccagatctccggcaagacgaagaagatacagtcgctccagttccagttcatct
cgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (88)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (104)   

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