KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_211312
Entry
LOTGIDRAFT_211312 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lgi03041]
    LOTGIDRAFT_211312
Spliceosome [BR:lgi03041]
 Complex C
  Other components
   Complex C specific factors
    LOTGIDRAFT_211312
SSDB
Motif
Pfam: Helicase_C HA2_C HA2_N DEAD AAA_22 nSTAND3 ABC_tran RsgA_GTPase
Other DBs
NCBI-GeneID: 20246282
NCBI-ProteinID: XP_009066474
JGI: 211312
UniProt: V3ZPA3
Position
Unknown
AA seq 611 aa
MNRPPSINTSTGTRTKPMKFWKPGSEAPGSQLNQERIKEHDTDSTTTVYNIYRNLTIEQQ
RLKLPVFQHRNNILHLVEKFQTVVIIGETGCGKSTQIPQYLLEAGWGNQGYCIGVTQPRR
VAAVSVCSRVAEERGCLLGDEVGYLIRFDDCTDEHNTKLKFLTDGMLIREIMKDPLLSKY
SIIMLDEAHERSLNTDIIMGLMRKIQKKRDDLKLIVTSATLNAEEICGFFNTNESDNKEN
DTASILTIEGREYPVDIHYTIDPIPDYLKYAVETVTKVHFTQRPGDVLVFLTGQDEVLKV
VDLLIEEARKLPKDSEKLQILPMYGSLPAPEQMRVFSRTPQNTRKVVVATNIAETSITIN
GIVYIIDCGFVKIKAYNPKTGVESLIITPISQASANQRAGRAGRVRAGKAYRLYTEEDFD
KLPTSTIPEIQRSDMAPVILQLKALGIANIVRFHFLSPPPAQNLVRGLELLYALGAIDDN
CNLKSELGQQMAEFPLSPMFSKMLLVSGEYGCSEEALSVAAMTQIQNVFITPSSQRIQSD
KCRRKFTVEEGDHVSLINVYEAFLKFGQNAKWCHEYFLNYKGLCRAVEIRNQLKRMLIKY
NIPLISCGGRI
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgaatcgccctccatctataaatacaagtaccggtactagaactaagcctatgaagttt
tggaaacctggcagtgaagctccaggaagtcagctgaatcaagaaagaataaaagagcat
gatacagattccaccactactgtttataatatttatcgtaacttgacaatagaacaacaa
agactcaaattaccagtctttcaacatcgtaataatattctacatctagtagaaaaattt
caaaccgtagttattattggtgaaacaggatgtggtaaaagtactcaaataccccagtat
ttattagaagcaggttggggtaaccaaggttattgtataggtgtaacacaaccaagacgt
gtagctgctgtttctgtttgttcacgtgtagctgaagaaagagggtgtttattaggagat
gaagttggttatttaataagatttgatgactgtacagatgaacacaacactaaacttaaa
tttttaactgatggtatgttaattagagaaataatgaaagatcctctcctttcaaaatat
agtatcattatgttggatgaagctcatgaaagatcattaaatacagatattataatgggg
ttaatgagaaagattcaaaagaaaagagatgatttaaaacttattgtgacttctgctaca
ttgaacgcagaggaaatatgtggttttttcaacaccaatgaaagtgataataaagagaat
gatacagcttccatattaacaatagaaggtagagaatatcctgttgatattcattatacc
atagatccaataccagactatttaaaatatgcagtggaaactgttacgaaagtccatttt
actcagagacctggtgatgtattggtttttttaactggacaggatgaagtactaaaagtt
gttgatttgttaatagaggaagcaaggaaattgcccaaagatagtgaaaaattacaaatt
ttaccaatgtatggtagtttaccagccccagaacagatgagagtttttagtcgtacacct
caaaatacaagaaaagttgttgtagcaaccaatatagctgagacttcaataacaataaat
ggtattgtctatataattgattgtggttttgttaagattaaagcgtataatccaaagact
ggcgtagagagtttgatcattacccctatatcacaagcatcggccaatcaaagagcagga
agagctggtcgtgtgagagcaggcaaagcatatcgtctttatacagaagaagattttgat
aaactacctacctctacaataccagagatacaaagatctgatatggcaccagttatactg
caacttaaagctcttggaatagctaatattgtcaggtttcattttctctctccaccccca
gctcagaatcttgtaagaggattagaattattgtatgctttaggagctatcgatgataat
tgtaacttaaaatcagaattaggacaacaaatggctgagtttcctctatcaccaatgttt
tccaagatgttattagtgtcaggtgaatatggttgttctgaagaagcattaagtgtagca
gctatgacacagatacaaaatgtttttattactccctcttctcaaagaatacaatctgat
aaatgtcgtagaaaatttactgttgaagaaggagaccatgtatcattaattaatgtgtat
gaagcatttttaaagtttggtcaaaatgccaaatggtgccatgaatattttctaaattac
aaaggcttatgtcgagctgttgaaataagaaaccaactaaaaagaatgttaataaaatac
aatataccattgatatcatgtggaggtaggatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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