KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_58640
Entry
LOTGIDRAFT_58640  CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LOTGIDRAFT_58640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_58640
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_58640
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     LOTGIDRAFT_58640
   Coactivators
    SAGA/TFTC/STAGA complex
     LOTGIDRAFT_58640
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     LOTGIDRAFT_58640
    STAGA complex
     LOTGIDRAFT_58640
    TFTC complex
     LOTGIDRAFT_58640
    SAGA complex
     LOTGIDRAFT_58640
    SLIK complex
     LOTGIDRAFT_58640
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa Tic110 TAF4 CENP-T_C TFIID-18kDa TAF
Other DBs
NCBI-GeneID: 20251458
NCBI-ProteinID: XP_009064287
JGI: 58640
UniProt: V3Z331
Position
Unknown
AA seq 117 aa
GSVGAATVSDSKVLDKRRLQELVKEVDPLEQLDDDVEEVLLQVADDFIENVVSSACQIAK
HRKSNTLEVKDVQLYLERTWNMWLPGFGSEDVRPFKKACVTEAHKQRMALIRKTLKK
NT seq 351 nt   +upstreamnt  +downstreamnt
ggatctgttggtgctgctactgttagtgatagtaaagtattagataagagaaggctacaa
gaattagtgaaagaagttgatcctttagaacaactagatgatgatgtggaagaggtgttg
ttacaagtagcagatgattttatagagaatgttgttagctcagcttgtcaaatagctaaa
catagaaaatctaatacattagaagtaaaagatgttcagctatatctagaaagaacatgg
aacatgtggttacctggatttggttcagaagatgtccgaccatttaaaaaggcctgtgtt
acagaggctcataaacagagaatggctttgataagaaagacattaaagaaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (69)   

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