KEGG   Companilactobacillus ginsenosidimutans: ABM34_03135
Entry
ABM34_03135       CDS       T03990                                 
Name
(GenBank) single-stranded DNA-binding protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lgn  Companilactobacillus ginsenosidimutans
Pathway
lgn03410  Base excision repair
lgn03430  Mismatch repair
lgn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lgn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ABM34_03135
   03430 Mismatch repair
    ABM34_03135
   03440 Homologous recombination
    ABM34_03135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgn03400]
    ABM34_03135
DNA repair and recombination proteins [BR:lgn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ABM34_03135
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ABM34_03135
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ABM34_03135
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 ATP-synt LMWPc
Other DBs
NCBI-ProteinID: AKP66648
UniProt: A0A0H4QIY6
Position
complement(602329..604641)
AA seq 770 aa
MVSIKWTKRQSPTQDEISKFSSENNLSNTVSELLLERNFSDKEEITEFLNPNITGLQDPF
ALHDMDKALETLDEVIQSEGKIAIYGDYDADGVTSASIMRLTLKKMGVNPIVFIPNRFKD
GYGPNLDEYKKLVEEKHINLLITVDNGVSGKEQVKYLKDNGVKVIITDHHDLPAELPEAD
AIVHPSIPGSEYFCPYLSGAGVAFKFADALLGDDALNFVDLAAIGTVADSVKLVGENRVI
VTEGLKRMSKNQNVGLMALAKKTKLDLNKVNEEDIGFKIAPRLNAIGRLDDATSAMELLT
TSDAGLAADIVDETEEINAKRQQLVADAFADSQEQIQQQSENGVLVLTSDTWHQGILGIV
ASRVVEQEHKPTLVLCYDKDSELYKGSGRSPEGFNLFDALNAHNELFAGFGGHAQACGFS
LAEPQLNELIPLLQEEPAKQGFDPHSSVEKLFDLNFQISDFSTDLINEINQLAPFGMGNP
KPVIKLSDVHLTNSTGVGKDKSHLKTTIADSQNQIPGIGFSLFSKSLEIKDNLCDVYGQL
GVNEWAGRSILQMLINDIEFAPEAQEENKLESIYIDYRQKQLSKALMDRFDSIVCFNAGY
YQMLQRHDLNAKVEMFDADFNHQNILIYDRPHDIKVFEQFLQSNKTAHTALYLHTSIKSG
YLSPDMNKMKILLKYLYAHDNIKPDDMEVVAKFLNIDKNDADFYLKVFFELNFVKMVNGF
VKKAEVSEQRELIESPTYLKRLQRNDVEKILIESNFDDLLNWISDYDCHN
NT seq 2313 nt   +upstreamnt  +downstreamnt
ttggtttcaattaaatggacaaaacgtcaaagtccaactcaagatgaaatttcaaaattt
tcaagtgaaaataatttaagcaatacagtatcggaattgttattggaacgaaatttttct
gataaagaagaaataacagagttcttgaatcctaatattactggattacaagacccattt
gcattgcatgatatggataaagcactggaaaccttggatgaagtaattcaaagtgaaggc
aaaattgctatttatggtgattatgatgctgatggtgttactagtgcatcaattatgaga
ttaacgctcaaaaaaatgggagttaatccaatcgtatttattcctaatagattcaaagat
ggatatggtcctaatttagatgagtataagaaactagttgaagaaaaacatattaactta
ttaatcactgttgataatggtgtgagtggtaaagagcaagttaagtatttgaaggataat
ggggtaaaggttattattactgatcaccatgatttgcccgcagagttacctgaagcagat
gctattgttcatccatcaattccagggtcagagtacttctgtccttatttatctggtgca
ggggtagcatttaaatttgctgatgcactcttaggtgacgatgccctaaattttgtagat
ttggctgcaattggtacagttgctgattcagtaaaattagtgggtgaaaaccgtgtaatt
gtcactgaaggattaaaacgtatgagtaaaaaccagaatgtcggtctcatggcgttagcg
aaaaagactaaattggatttaaacaaggttaatgaggaggacattgggttcaaaattgcc
ccaaggcttaatgctattggtcgtttagacgatgccacttccgctatggaattattgaca
actagtgatgctggactggcagcagacatagtagatgaaactgaagaaattaatgccaaa
cgccaacaactggttgcggatgcgtttgctgattcgcaagaacaaattcaacaacaaagt
gaaaacggagtcctcgtattaactagcgatacgtggcatcaaggaattcttggtattgtc
gcaagtcgtgttgttgaacaagaacacaaaccaacacttgttctttgttatgacaaggat
tcagaattatacaaaggatcgggccgtagtccagaagggtttaacttatttgatgcatta
aatgcacacaatgaattatttgctgggtttggtggtcatgctcaagcatgcggtttctct
cttgctgaaccacaattaaatgaactaatacctttgcttcaagaagaaccagctaaacaa
ggatttgatcctcacagctctgttgaaaaattgtttgatttgaatttccaaataagtgat
ttttctacggatttaattaacgaaatcaatcagctggcaccttttggtatgggaaatcct
aaaccggttataaaattatcagacgttcatttaaccaacagcactggtgttggtaaagac
aaatctcatttgaagacgacaattgctgatagtcaaaatcaaattccaggaattggattc
agtttgttttccaaatcactggaaattaaagataatctctgtgatgtgtatggccagtta
ggcgtaaatgagtgggcaggtcgttcgatacttcagatgctgattaatgacattgaattt
gctcctgaagcacaagaagaaaataagcttgaatctatctatatcgattatcgtcaaaaa
caactttcaaaagcattgatggatagatttgatagtattgtttgcttcaatgctggatac
tatcaaatgttacaaagacatgatttgaatgcaaaagtggaaatgtttgatgctgacttt
aatcatcaaaacattttaatatatgaccgtcctcatgatattaaggtttttgagcaattc
ttacagtctaataagactgcacatacggcactatatttgcacacaagtatcaagagtggg
tacttatcacctgacatgaataaaatgaaaattttgttaaaatatttgtatgcacatgat
aatatcaagccagatgacatggaggtagtggctaaattcttgaatatagataaaaatgac
gcagatttctatttaaaagtgttttttgagctaaattttgttaaaatggtaaatggcttt
gttaaaaaagcagaagtatcagaacaacgcgaattaatcgaatctccaacttatttgaaa
cgattacaacgcaatgatgttgaaaaaatactaattgaatctaattttgatgatctgcta
aattggatcagtgattatgactgtcataactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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