KEGG   Lactococcus garvieae ATCC 49156: LCGT_0232Help
Entry
LCGT_0232         CDS       T01618                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lgr  Lactococcus garvieae ATCC 49156
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lgr00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LCGT_0232
Enzymes [BR:lgr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LCGT_0232
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LCGT_0232
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
236942..237763
Genome map
AA seq 273 aa AA seqDB search
MPELPEVENVRRGLEKLVRNKKILEIESSYPRMVLTGFEALKKELEGQVIKDIQRRGKYL
LFDFGQWTLISHLRMEGKYRVEPLDFVKQKHDHVFVKFSDATLIYADVRKFGTWELLKSQ
DVERYFISKKIGPEPSFETFDEGIFAEKLKKSKKKIKPYLLDQTLVAGLGNIYVDEVLWR
SQVHPEMLASALSESQIHRIHDYTIEVLQTAVERGGSSIRTYKNAMGEEGSMQELLMVYG
KQGQLCPNCQHVVIEKIKVAGRGSHFCPYCQKV
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttaccagaagtcgaaaatgtacgccgaggcttggaaaagctggtgagaaat
aaaaaaatattggagattgaaagttcttatccacgaatggttttaacaggattcgaggcg
ctaaaaaaagaacttgaaggtcaagtcatcaaagatatccagcgccgtgggaagtacttg
ctttttgattttggccagtggaccttgatttcccatttacgtatggaggggaaatatcgg
gtggaacccctggactttgtaaaacaaaagcatgatcatgtctttgtcaagttttcagat
gcgacacttatttatgcagatgtccgcaagtttgggacttgggaattattgaaaagtcag
gatgttgaacgttatttcatttcgaaaaagattggcccagagcccagctttgaaaccttt
gatgaggggatttttgctgaaaaactaaagaaatcgaaaaaaaagataaaaccttatctt
ttagatcagactttagttgctgggctaggaaacatctatgttgatgaggtactttggcga
tcacaagtgcatcctgaaatgttggcttcagccttgagtgaatctcaaattcaccgcatt
catgattatacgattgaagtcctccaaacggcagttgaacggggaggttctagtatacgg
acttataaaaatgcgatgggtgaggaaggaagtatgcaggaattgctcatggtttatggc
aagcaagggcaactttgtcccaattgccagcacgtggtgattgaaaagataaaggtcgca
ggacgcggctcacatttttgtccatattgtcaaaaagtatag

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