KEGG   Lactococcus garvieae ATCC 49156: LCGT_0554
Entry
LCGT_0554         CDS       T01618                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
lgr  Lactococcus garvieae ATCC 49156
Pathway
lgr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LCGT_0554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgr03400]
    LCGT_0554
DNA repair and recombination proteins [BR:lgr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LCGT_0554
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 GIY_YIG_2 5_3_exonuc DUF1104
Other DBs
NCBI-ProteinID: BAK58067
Position
572854..574629
AA seq 591 aa
MNNTIKAKLELLPDSPGCYLHKDKNGTVIYVGKAKNLKNRVRSYFHGSHNTKTELLVSEI
EDLEWIVVESNIESLVLEINLIQRYKPKYNIMLKDDKYYPFLMITNEKYPRLMITRRVKK
DGAMYFGPYPDVKAANEVKRLLDRIFPFRKCGLHEKKVCFYYHIHQCLCPVVNHVDPQVY
KDMAQEVKHFLTGDDKKIINELKERMFAASEKMEFEQAAEYRDVINSIGTLRTKQRVMNH
DLKDRDVFGYYVDKGWMCVQVFFVRQGKMIQRDVNLFPYYNDAEDDFLTYIGQFYQEAAH
MVPKEILVPSEIDAEAVEAVTQTKVLKPSRGEKKQLVAMATKNARTQLQLKFDLLEKDLI
KTQGAIENLGKILNIPTPVRIESFDNSNIMGTSPVSAMVVFINGKPSKKDYRKYKIKTVE
GADDYASMREVITRRYSRAMREGTALPDLIAMDGGAGQVNAAKTILKEIGLDIPVAGMAK
NDKHQTSELLFGDPLEVVPLSRQSQEFFLLQRIQDEVHRFAITFHRQVRGKNTFSSKLDG
ITGLGPKRKQKLMTTFKSLKAISEADVAQVAEAGVPYDVAERVKEVLSKEN
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaataacacgattaaagcaaagctggagctcttaccagatagtccaggatgctattta
cataaagataaaaatgggacggttatctatgtagggaaggcgaaaaatctgaaaaatcgc
gtgcgctcctattttcatggctcccataatacaaagactgagcttttagtcagtgagatt
gaagatttagaatggattgtggttgaatcaaacattgagtctttggttcttgaaattaac
ttgattcaacgatataagcccaaatataatatcatgcttaaggatgataagtattatcct
tttctcatgattacaaatgaaaaatatccacgtttgatgattacccgtcgtgtcaagaaa
gatggggcaatgtattttggaccttatcccgatgttaaagcagccaatgaagtcaagcgc
ctcttagaccgtatctttccttttcgaaaatgtggtttgcatgaaaagaaagtctgtttc
tattatcatatccatcagtgtctttgtccagtcgttaatcatgtagatcctcaggtttat
aaagacatggctcaagaagtcaaacattttttaacaggggatgataaaaaaattatcaat
gaactgaaagaaagaatgtttgcagcttcggaaaaaatggaatttgagcaagcggcagaa
taccgtgatgtaattaattctattgggactttgagaacgaaacaacgtgtcatgaaccac
gatttaaaagaccgcgatgtttttggttactacgtggataaaggctggatgtgtgtgcag
gtcttcttcgtacgccaaggtaaaatgattcaacgtgatgtcaatttgtttccttattac
aatgatgcagaagatgattttttaacttatatcggacagttttatcaagaagctgcacac
atggtacccaaagaaattttagtgccctcagaaattgatgcagaggctgttgaggcagta
acacaaactaaagttctcaaaccaagccgtggagagaagaagcaacttgtagcaatggcg
actaaaaatgcacgcacccagctacaattgaaatttgaccttctcgaaaaagacctgatt
aaaactcaaggtgctatcgaaaatctcgggaaaattctcaacattcctacaccagttaga
atcgaatcgttcgataactctaacataatgggaacttcacccgtatcagcaatggttgtc
tttatcaatggcaagccttccaagaaagattatcggaaatacaagattaaaactgtcgaa
ggtgcagatgattatgcatcaatgcgtgaagtgattacgcgacgttatagccgggctatg
cgtgaaggaacggctttacccgatttgattgcaatggatggtggtgctggacaagtcaat
gcagctaagactattttgaaagaaataggtttagatattcctgttgcaggtatggctaaa
aatgataaacaccaaaccagcgagttactttttggtgatcctttggaagtcgtaccgctg
agtcgccaatcgcaagaattctttctcctccaacgcattcaagatgaagtccatcgcttt
gcgattacttttcaccgacaggttcgtgggaaaaatactttctcttcaaaactggatggt
attacaggacttggaccaaaacgtaagcaaaaattaatgacgaccttcaagtcactgaaa
gccatttctgaagctgatgtggctcaggtcgctgaagcaggcgtaccgtatgatgtcgct
gaacgggtcaaggaagttttgagcaaagaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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