KEGG   Lactococcus garvieae Lg2: LCGL_1070
Entry
LCGL_1070         CDS       T01963                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lgv  Lactococcus garvieae Lg2
Brite
KEGG Orthology (KO) [BR:lgv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lgv03032]
    LCGL_1070
   03400 DNA repair and recombination proteins [BR:lgv03400]
    LCGL_1070
Enzymes [BR:lgv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     LCGL_1070
DNA replication proteins [BR:lgv03032]
 Prokaryotic type
  DNA Topoisomerases
   LCGL_1070
DNA repair and recombination proteins [BR:lgv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LCGL_1070
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF2996 Toprim_4
Other DBs
NCBI-ProteinID: BAK60530
UniProt: F9VDX9
Position
1090207..1092420
AA seq 737 aa
MTSDLKAYIIRLLKIEKIGKYMAKASEKQTTKKKKTSSKKTASKKKTKIVKGKNLVIVES
PAKAKTIEKYLGRNYKVVASVGHIRDLKKSTMSVDIDNDYEPQYINIRGKAPLINSLKKE
AKAAKAVYLASDPDREGEAIAWHLAHILGLPLEDKNRVVFNEITKDAVKNAFKEPRSIDV
DLVDAQQARRILDRLVGYSISPILWKKVKKGLSAGRVQSIALKLIVDRENEINAFIPQEY
WSIDGEFKKGAKKFKAAFWGVDGKKRALNNNDDVMEVMSRLSGPDFDVDKVEKKERRRNS
PLPYTTSSMQQDAANKINFRTRKTMMVAQQLYEGLTLGAQGHQGLITYMRTDSTRISPVA
QGVAADFITDRFGAKYSKHSSKVSNKAGAQDAHEAIRPTNVLNTPEAIAKYLDKDQLKLY
TLIWNRFVASQMTAAIFDTMKVNLSQNGVIFIANGSQVKFDGYLAIYNDSEKNNMLPDIA
AGDVVKKANLKPEQHFTQPPARYSEATLIKVLEENGVGRPSTYAPTLETIQKRYYARLVA
KRFEPTELGEIVNKLVVEFFPNIVNTEFTAEMEKDLDKVEEGQRRWVDVVDQFYKPFAVE
LEKAEVEMEKIVIKDEPAGFDCDVCGHPMVIKLGRYGKFYACSNFPECHNTKAIVKEIGV
TCPSCHKGQIIERKTKKNRLFYGCDRYPECEFTSWDKPVGRSCPKCEHYLVEKKVRGGGK
QVVCSNETCDYKEEKQK
NT seq 2214 nt   +upstreamnt  +downstreamnt
ttgacatctgacctaaaagcctatattattagactattgaaaattgaaaaaataggtaaa
tatatggcgaaagcaagtgaaaaacaaacaactaaaaaaaagaaaacgagcagtaaaaaa
actgcgagtaaaaagaaaacaaaaattgttaaaggcaaaaatctcgtaattgttgagtca
cctgctaaagcaaaaacaattgaaaaatatttaggacgaaactataaagttgtggcatct
gttgggcatatacgtgatttgaaaaaatcaacaatgtccgtagacatcgacaatgattat
gagccacaatatattaatatccgtggaaaagcgccactgatcaattctcttaaaaaagag
gccaaagctgcaaaagctgtttatctggcaagtgacccggaccgagaaggagaagccatt
gcttggcacttggcacatattttaggtcttcctttggaagataaaaatcgggttgttttt
aatgaaatcactaaagatgccgttaaaaatgcatttaaagaaccccgcagtattgatgtt
gatttggtcgatgcacaacaagctcgtcgtattttagatcgtttagtggggtattcaatc
agtccaatcctttggaaaaaagttaaaaaaggattatcggctggccgtgtccagtctatc
gcccttaaattgattgtggatcgcgaaaacgaaatcaatgctttcatcccccaagaatat
tggtcaattgatggtgaatttaaaaaaggagctaaaaagtttaaagctgctttctggggt
gttgacggcaagaagcgagcactaaataacaacgatgatgttatggaagtgatgtcacgg
ttgtctggtccagatttcgatgttgataaagtagagaaaaaggaacgtcggagaaattcg
ccgctgccatacacaacaagctccatgcaacaagatgcagcgaataaaattaatttccgt
acacggaaaaccatgatggttgcccaacagctttatgaggggctcacattgggggcacaa
ggtcatcaagggctgattacctatatgcgtaccgattcaacgcgtatctctccagtggcg
caaggcgtcgctgcagatttcattacagatcgttttggcgctaagtatagcaaacattct
tcaaaagtttctaataaagctggtgctcaagatgcccatgaggcaattcgtcccaccaat
gttcttaatacccccgaagcaattgcgaaatatctagacaaggatcagttaaagctttac
actttaatctggaatcgctttgttgcaagtcaaatgactgctgctatttttgatacaatg
aaagttaacctttcgcaaaatggtgtgattttcattgccaatggctcacaagttaaattt
gatgggtatttagcaatctataatgactctgagaaaaacaacatgcttcctgatattgcc
gctggagatgttgttaagaaagcaaatcttaaacctgaacaacactttactcaaccgcct
gcacgttacagtgaagcaaccttgattaaagtgttggaagaaaatggagttggccgccca
tcaacatatgcaccaacgcttgaaacaatccaaaaacgttattatgcccgtttagtggcc
aaacgttttgaaccgactgaactaggtgaaattgtaaataaacttgtggttgaatttttc
ccaaacattgtaaatacggaatttacagctgaaatggaaaaagatctggataaagtagaa
gaaggacagcgccgttgggttgatgttgttgatcaattttataaacctttcgccgttgaa
ctcgaaaaagccgaagttgaaatggaaaaaatcgtcattaaagacgaaccagctggtttt
gattgtgatgtttgtgggcatccaatggtgattaagttgggacgatatggtaaattctat
gcatgcagtaatttcccagaatgtcataatactaaagccattgtgaaagaaattggcgta
acttgtccaagttgccacaaagggcaaatcattgagcgtaagacaaagaaaaaccgtctt
ttctatggatgtgacagatacccagaatgcgagtttacaagctgggataaacctgttggg
cgttcttgtccaaaatgtgagcattatttggtagaaaagaaagtacgtggcggtggcaaa
caagttgtatgtagcaatgaaacttgtgactacaaagaagaaaaacaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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