KEGG   Lysinibacillus varians: T479_14235
Entry
T479_14235        CDS       T03062                                 
Name
(GenBank) exodeoxyribonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
lgy  Lysinibacillus varians
Pathway
lgy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    T479_14235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgy03400]
    T479_14235
Enzymes [BR:lgy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     T479_14235
DNA repair and recombination proteins [BR:lgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     T479_14235
SSDB
Motif
Pfam: Exonuc_VII_S CDK5RAP3 DUF6097 MAS20 KNOX2 DUF1657
Other DBs
NCBI-ProteinID: AHN22355
UniProt: A0A806LKW8
Position
complement(2849452..2849685)
AA seq 77 aa
MAKKQQTFAEAMTALEEIVRQLEQGDVPLENAIDLYKQGMELSQFCHSKLQHAEEQLISI
VQETGETTVFDPLKGEN
NT seq 234 nt   +upstreamnt  +downstreamnt
atggcgaagaaacaacaaacattcgcagaagcaatgacggcacttgaagaaatagtccgc
caattagagcagggtgatgtgccattagaaaatgctattgatttatataagcagggcatg
gagctttcacagttttgccatagtaaactacagcatgccgaggaacagttaatttcaatt
gttcaagaaacaggcgaaacaacagtatttgatccgctaaagggagagaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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