KEGG   Lysinibacillus varians: T479_23505
Entry
T479_23505        CDS       T03062                                 
Name
(GenBank) multidrug ABC transporter permease
  KO
K18104  ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
Organism
lgy  Lysinibacillus varians
Pathway
lgy01501  beta-Lactam resistance
lgy02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    T479_23505
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    T479_23505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lgy02000]
    T479_23505
   01504 Antimicrobial resistance genes [BR:lgy01504]
    T479_23505
Enzymes [BR:lgy01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     T479_23505
Transporters [BR:lgy02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    T479_23505
Antimicrobial resistance genes [BR:lgy01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AbcA [MD:M00700]
    T479_23505
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_membrane_3 SbcC_Walker_B
Other DBs
NCBI-ProteinID: AHN23852
UniProt: A0A806LR39
Position
complement(4619224..4620933)
AA seq 569 aa
MNNSVRGIWQLVNSNRLSKKLTIGTLLLSIVETLIGLTVPLFTMRMINDFSTIGFSWQSI
LLVGVFLIFQAVLSGVTFYMMRKLGERIVANLRMKVWAHVLRLRIPYFDAHESGETMSRI
TQDTNVIKELITDHLISFISGLFAIVGAVIILIIIDWKMTLLMLISVPVAILLTLPLGQR
IHKIARANQDELASFTGQLGRVLTNIRLVKTSQTENYEQLNGEEKIQHLYQFGLKESKIL
AVLSPIMTFIMMVVLILLFGYGGAKVATGAITAGELVAIIIYLVQIIIPFTQMATFFTSL
QKAMGATERLQEILNEPIEGHGKNAIASSNESITFENVVFQYNDNPILKGISFTIPTGKT
TALVSASGGGKTTMFSLIEQFYHVTEGTIRFGEQPIEQIHLKEWRSLFGYVSQEAPLMNG
TIRDNVTYGKSDVLETDIIEALKNAYAWDFVQQFERGLDTEVGEGGMKLSGGQRQRIAIA
RALFRNPAILLLDEATSNLDNDSERAVQKAIEYVMKGRTTVIIAHRLSTIVHADQILVFE
DGLITGSGKHEELQEHHTYYKQLIKLMTQ
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgaataattcagtacgaggcatttggcagcttgtgaatagcaatcgattatcaaagaaa
ctgacgataggcactcttttactgagtattgttgaaacacttattggattgactgtgcca
ttatttacgatgagaatgattaatgatttttcaacgattggtttctcatggcagtccatt
ttattagtaggtgtatttcttattttccaggctgtacttagtggtgtaacgttttatatg
atgcgtaagcttggggaaagaattgtggctaatttgcgtatgaaggtatgggcgcatgtt
ttacggttacgtattccttactttgatgcacatgaatctggggaaaccatgagcagaatt
acgcaagatacgaatgttattaaggaacttattacagatcatttaattagttttatttcg
ggcttatttgccatcgtgggtgcggtaataatattaatcatcattgattggaaaatgaca
ttattgatgctaatatcagtgccggtagccattttattgaccttgcctctgggacaacgt
attcataaaatcgcgagggcaaatcaagatgagcttgctagttttacaggacagttgggg
cgtgtattaacgaatatacgactcgtgaaaacgtcgcaaacagaaaattatgagcagcta
aatggagaagaaaaaatccaacatttgtatcaatttggattaaaagaatcaaaaatttta
gccgtgttatcacccattatgacgtttattatgatggtggtactcattttattattcggc
tatggcggcgcaaaagtagcaacaggtgcgattactgcaggtgaacttgtagcgatcatt
atttaccttgttcaaatcattattccatttacacaaatggcaacatttttcacttcgctt
caaaaggcaatgggtgcaacagaacgattacaagaaattttaaatgaaccaattgaagga
catggaaaaaatgctattgcgtcttccaatgagtcaattacttttgaaaatgttgtgttt
caatacaatgataatccaattttaaaaggtatttcttttacgattccaactggtaaaaca
accgcattggttagtgccagtggcggagggaaaacgacaatgttttcattaatagaacaa
ttttatcatgttacagagggtactattcgatttggagaacagccaattgaacaaatccat
ttaaaggagtggcgtagcttatttggatatgtttcgcaagaagctccacttatgaatggc
acaattcgtgataatgtaacatatggaaaaagtgatgttttagaaacagatattatagag
gcattaaaaaatgcctacgcatgggattttgttcaacagtttgaaagaggattagataca
gaagtaggcgaagggggaatgaaattatcagggggacaaagacaacggatagcaatcgca
cgtgctttattccgaaatccagcaatcctattattagatgaagcaacatctaaccttgat
aatgactcagagcgagcggtacaaaaggcaatagagtatgttatgaagggacgtacaacc
gttattattgcacaccgtttatctacaattgtacatgccgatcaaattttagtgtttgag
gatggccttattacgggttcaggaaaacatgaggaacttcaagaacatcatacgtattat
aaacagctaattaaactaatgacacagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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