KEGG   Lactobacillus helveticus KLDS1.8701: HUO_02605
Entry
HUO_02605         CDS       T03777                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lhd  Lactobacillus helveticus KLDS1.8701
Pathway
lhd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lhd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HUO_02605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhd03021]
    HUO_02605
   03400 DNA repair and recombination proteins [BR:lhd03400]
    HUO_02605
Enzymes [BR:lhd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HUO_02605
Transcription machinery [BR:lhd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HUO_02605
DNA repair and recombination proteins [BR:lhd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HUO_02605
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: AJY60921
UniProt: A0A0D5MGF7
Position
504622..505560
AA seq 312 aa
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDERKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMEIAVQNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFATKILVEHFKVFESADADTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDMTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaactctttaagaaga
gtcttacttacttctattcctggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaagattattcttaatttg
aagaagcttgaattaaagtctctttcagatgaaagaaaggttattgaattggacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttaaat
ccggatcaatacatttgtaccattgctgaaggtggacacttgcacatggaaatcgccgta
caaaatggtagaggttatgttgctgcaagtgacaataagagtgatgacatgccaattgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgattttgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctactaagattttagttgaacatttcaaa
gtatttgaatcagctgatgcagatactaaattcagcgaagtaatggtggaaaaggaagac
gacaagaaagaaaagaaactcgaaatgacaattgaagagcttgatctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgatatgacagag
tcagatatgatgcgtgtacgtaacttgggacgtaaatcattggaagaagttaagaataaa
ttaaccgacttaggtctttcacttcgtcaggaagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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