KEGG   Lactobacillus helveticus H10: LBHH_0561Help
Entry
LBHH_0561         CDS       T01959                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lhl  Lactobacillus helveticus H10
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lhl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LBHH_0561
Enzymes [BR:lhl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LBHH_0561
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LBHH_0561
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
584856..585686
Genome map
AA seq 276 aa AA seqDB search
MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL
LIRLSDNLTIVSHLRMEGKYHLTISDAPKDKHDHVEFIFTDGTALRYNDVRKFGRMQLIL
TGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGLGNIYVDEVL
WRTKIHPLSQANKIPAEKVIELHDQINQIITEAIKLQGTTVHSFLNANGQVGGFQSKLQV
YGHVGEPCPVCGTKFEKIKVNGRGTTFCPHCQVIYK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaaatgccggaagttgaaacggttcgaagaactttgattcctttaattaaagga
aaaactattgaaaaagtgattttgtggtatcccaaaatcgtagcgacagatcatgaaaag
tttttatctgaattacctggtaaaaaaatcattgatattgatcgttatgctaagtatttg
cttattcgtttgagtgacaatttgacgattgtttctcatttgcgaatggaagggaagtac
catctaaccatatctgatgcgcctaaagataaacatgatcatgttgagtttatttttacg
gatggaacagccttacggtataatgacgtgcgcaagtttggtcggatgcaattaatttta
actggaactgaaaggcaaactacagggattggcaaattaggttatgaaccaaatagttct
gaatttacatcagaatatttggtaaatggcttaaaacgtaagaagaaaaatatcaaaaat
actttgcttgaccagtcagtagtggccggccttggcaatatttatgttgacgaagtcttg
tggcggactaagatccatcccttgagtcaggctaacaaaatccctgctgaaaaagtaatt
gaattgcatgatcagattaaccaaattattaccgaagcaattaaattgcaaggtacgact
gtccattcctttttaaatgcaaatggtcaagttggcggctttcaaagcaagttgcaagtc
tatggccatgtaggtgaaccttgtccggtttgcggcacgaagtttgaaaaaattaaggtt
aatggtcgaggtaccactttttgccctcattgtcaggtgatttataaatga

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