KEGG   Lactobacillus helveticus R0052: R0052_06565
Entry
R0052_06565       CDS       T02217                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
lhr  Lactobacillus helveticus R0052
Pathway
lhr00330  Arginine and proline metabolism
lhr00480  Glutathione metabolism
lhr01100  Metabolic pathways
lhr01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:lhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    R0052_06565
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    R0052_06565
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    R0052_06565
Enzymes [BR:lhr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     R0052_06565
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C Beta_elim_lyase DUF6348
Other DBs
NCBI-ProteinID: AFR22131
Position
complement(1142549..1144645)
AA seq 698 aa
MDFLKIAFGNGVNLNKIKNWKTVPIDQVKNSAEIAAIVIQNKDPNAQKQAQALRNQSGFS
IPIIEVDQQVSTTDQEEIADLAKNYEQKMVPGFLTDLINFAQAKPISFTTPGHHNGQYYD
MHPAGVVFNKFFGKNFMFADTSDTVPQLGDTMTHAGTPLDAEKLAAKTYHADKVYFCTNG
TTSANSICASALLSEGDLVLFDRNNHKSLYNSALVMSGAKPVYIPTDRNALGLIGEMDPD
FLTEDKIRAEVAKGDPEKAKAKRPFRLAIVQAETYDGVFYDAKWIVDRIGKLCDYILFDC
AWGGFEEFVPIMRHLSPLLLSLGPDDPGILVTQSLHKQQAGMAQASQILKKDSHIKGQKR
YVDHKHFNHAYLKFVTSSYAYPLYASLTVNSYVTAGEGNKKWWAETLRMGIEWRKKLLKQ
SKLFKPLVPDNFAEIPTADLMDDAKYWNMSKNDDWHGFRKMGNGETMIDPLKITVRTPGI
DVKNAKYEKTGIPGAVVAEFLMENHIIRAKNDLNSLLFLLTPGDSQEELDTLLNAFLKFE
QYYDEDALVKDVLPVLYQEYPERYHGYTLKQLCQEMHEYYKENKTFVLQQKLFAKPNMQN
YQMTPAEADQLFKKDQTELVDLEDVVGRTAAEGALPYPPGVFIVAPGEKWGEIDQKYFEV
LAHAIEKFPGFVPEIQGVYLEPQKDGSIKVQVEVIKDR
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggattttttgaaaatagcgtttggaaacggcgttaatttaaacaaaataaaaaattgg
aagacagttccaattgaccaagttaaaaatagtgcagagatagctgcaattgtaattcaa
aacaaagatcctaatgcgcaaaagcaagcacaggcattaagaaatcaatctggcttttcc
attccaataattgaggttgatcaacaagtttcaacaactgatcaagaagaaattgctgat
ttagctaagaattatgaacagaaaatggtaccaggctttttaactgatctaattaatttt
gctcaggcaaagccgatcagttttactactccaggtcatcataatggtcagtattatgat
atgcatcctgctggtgtggtttttaataagttttttggcaaaaattttatgtttgcagat
accagtgacactgttccgcaattgggtgatactatgactcacgctggaacaccacttgat
gccgaaaaattagctgcgaaaacttatcacgcagacaaagtttatttctgtacaaatggt
acgactagtgctaactcaatttgtgctagtgcacttttatctgaaggagacttagtttta
ttcgatcgtaataaccataaatctttatataatagtgcattagttatgagtggcgctaag
ccagtttatattccaactgatcgtaatgcattgggcctaattggagagatggatccggac
tttttgactgaagacaaaattagagctgaagtagctaagggcgatccggaaaaagccaaa
gctaaacgcccatttagattagctattgtgcaagctgaaacatatgatggcgtattttat
gatgcaaagtggattgtcgatcgtatcggcaagctttgtgattatattttatttgactgc
gcgtggggcggatttgaagaatttgtcccaattatgagacatttgtcaccgctcctttta
agcctaggaccagatgatccaggaatcttagtaacacaatcgcttcataaacagcaagct
ggtatggctcaagcttcacaaattttgaaaaaagattcgcatattaaaggacaaaaacgt
tatgtggaccacaagcattttaaccatgcttatttgaagtttgttacttcttcatatgct
tatcctctttatgcatccctcacagtaaattcctatgttactgctggtgaaggcaataaa
aaatggtgggcagaaactttacgcatgggaatcgaatggcgcaaaaagttgttaaaacag
tctaagctattcaagccattggtgcctgacaattttgcggaaatccctactgctgattta
atggatgacgccaaatactggaacatgagtaaaaatgacgattggcacggctttagaaaa
atgggcaatggtgaaactatgatcgatccattgaagattacggtgcgtactcctggaatt
gatgttaaaaatgctaagtatgaaaaaacagggattcctggtgcggtagttgcagaattt
ttaatggaaaatcatattatcagagctaagaatgatttgaattcacttttgtttttgctt
acccctggtgattcgcaagaagagctagatactttgcttaatgccttcttaaagtttgaa
caatattatgatgaagatgcattagtaaaggatgttttgccagttttatatcaagaatat
cctgaacggtatcatggttatacattgaagcagctttgccaagaaatgcatgagtactac
aaagaaaataagacttttgttctgcagcaaaaattgtttgctaaaccgaatatgcagaac
taccaaatgaccccagctgaagctgatcaactttttaagaaagatcaaacagaattagtt
gatcttgaagacgtagtaggaagaacggcagccgaaggagcattgccatatccaccaggc
gtctttatcgttgcaccgggtgaaaagtggggagaaatcgatcaaaaatattttgaagtt
ttggctcatgcaattgaaaaattcccaggatttgtgccggaaattcaaggtgtttactta
gagccacaaaaagatggcagcataaaagtacaagtcgaagttatcaaggatagatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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