KEGG   Linepithema humile (Argentine ant): 105668530
Entry
105668530         CDS       T04898                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03022  Basal transcription factors
lhu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105668530
  09124 Replication and repair
   03420 Nucleotide excision repair
    105668530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhu03021]
    105668530
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105668530
Transcription machinery [BR:lhu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105668530
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105668530
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-RING_UBOX zf-P11 zf-UDP zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_4 TRAF3_RING ALKL1_2 zf-RING_6
Other DBs
NCBI-GeneID: 105668530
NCBI-ProteinID: XP_012216380
Position
Unknown
AA seq 322 aa
MDDQACPRCKTTKYRNPSLKMLVNVCGHTLCENCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDPMVEKEVNIRKRILRDFNKREEDFATLREYNDYLEEIETIIYNLANNIDVVETNK
RIEQYKRDNKEQIAKSKSKLGRSEYELEEMIELERQKEEERRIELVREDAEAKKKKIREK
EALIDELTFSDANAKNIVESFASAIQMQKKEVKASLPAARVTQFSTGIKFGNQGNQNYLP
MPKIEEGPLYSYTPIWQQIEGPTPPGWRELQSRGYVSHIRNESQAERAGGFKAHVACLRA
LQEAMAGLYHNPSQRQTEFTTV
NT seq 969 nt   +upstreamnt  +downstreamnt
atggatgatcaagcgtgtccacggtgtaaaaccaccaaatatcgaaatccatcattgaaa
atgctagtgaacgtttgtggccacacattatgtgaaaactgtgtagatttactttttttg
aaaggctctggatcctgtccagaatgcaaaattccattgagaagaacaaactttcgagtt
cagatgttcgaagatcctatggttgagaaggaagtgaatataaggaaacgtattctgcga
gattttaataaaagagaagaagattttgctacattaagagaatacaatgattacttagag
gaaatcgagactataatatataatttggcaaataacattgatgtggttgaaacaaacaaa
aggatagagcaatacaaaagggataacaaagagcaaatagcgaaaagtaaatctaaactt
ggcagaagtgagtatgaattagaggagatgatagaattagagaggcaaaaggaggaagaa
aggagaatagaacttgtaagagaagacgcagaagcaaagaagaagaaaattcgtgagaaa
gaagcattgatagacgagctaacattctcggacgcgaatgctaagaatattgtggaatca
ttcgcttctgcaatacagatgcagaagaaagaagtaaaagcctctcttcctgctgctaga
gttactcagtttagcacgggtattaaatttggtaatcagggaaatcagaactatttacca
atgccaaagatagaagaaggtcctctctattcttatacgcctatttggcaacaaatagaa
ggaccaacaccgcctggctggcgagaacttcaatctcgtggatatgtttcacatatacgt
aacgagtctcaggctgaaagagcgggaggattcaaggcacatgtagcatgtctacgagca
ttgcaggaagcgatggctggcttgtatcataatccttcgcaacgacagacagaattcaca
actgtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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