KEGG T04898: 105678855

Linepithema humile (Argentine ant): 105678855

Entry

105678855         CDS       T04898

Name

(RefSeq) nuclear pore complex protein Nup85

K14304

nuclear pore complex protein Nup85

Organism

lhu Linepithema humile (Argentine ant)

Pathway

lhu03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:lhu00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105678855
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lhu03019]
    105678855
   03036 Chromosome and associated proteins [BR:lhu03036]
    105678855
Messenger RNA biogenesis [BR:lhu03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105678855
Chromosome and associated proteins [BR:lhu03036]
Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    105678855

SSDB

Motif

Pfam:

Nucleopor_Nup85 CHCH Phage_Mu_Gp48

Other DBs

NCBI-GeneID:

105678855

NCBI-ProteinID:

XP_012233972

Position

Unknown

AA seq 642 aa
MDEADNAQIIVIPDDVCKKAGITTTWINSNRFGIHAYKHVDQRSQDIESQFAPCDAKVHF
IRPEIILFSPLLRKLVNESNGIFLSVQKLKSSSGDIKPELLKHSKQYRSILRACVENLQE
ILPKETLPEEKTMLENFQLIFYQVECIWHLTEILYVDAVPGDVVLPQLLEWISFHFPSRE
LAASKILSQKTIGADLENLNYWEAVIGCALHGKLNLVCRLLALHSKADHSAFITADNIIR
TMPVYNVYGGYSVNEFITRWKHWQMDLCSNLESNYFARDSDLETLMKLIAGDESILWEYS
KYTDAWYELLAAKLFYTAPCCKQQELSRYANSVAERWQANRHLDRIILALMENDLYQVIK
EIQYMSDNGWFAAHLIDLLYKCGKLNILNQEKANVTAQLHESLILEYATTLMSHRSLWQC
GASYLIHCPMQGLARLEILLQSLPTGTEARVNKIIDVARDNNMLHVVSSICKIQGMKSIK
QGRLGNALTWALRAHDGNFITYIADEFLKCYAEHGELECRDLLENLGSCMLASDRLTFLG
KYCEFHKMYTMDEFREAGNLLVSLLVSNLTPKYFWSILLTDAIPLLEAEDVIFSSNDCYE
LLRCVEAHGNDPKFQDKVSIFRIGVARNLARALSLEGCQAEH

NT seq 1929 nt +upstreamnt +downstreamnt
atggatgaagccgacaacgctcaaataattgttataccagatgatgtttgtaaaaaagca
ggcattacgacaacttggataaatagcaacagatttggaatacacgcgtacaaacatgta
gaccaacgatcacaagatattgaaagtcagtttgcaccatgtgatgccaaagtacatttt
attcggccagaaatcatattattttcaccactcttgcgtaaattggtcaatgagagtaat
ggtatctttctgtcagttcaaaaacttaaatcttcttctggtgacattaaaccagaactt
cttaaacacagtaagcagtatagatccatattgagagcttgtgttgaaaacttacaagag
atattaccgaaagaaacactgccagaagaaaagacaatgctggaaaattttcaacttata
ttttatcaagtagaatgcatttggcatttaacagaaattctttatgtcgatgctgtacca
ggtgatgttgtgttaccacagttattggaatggatcagttttcattttccctcaagggag
ctggcggcatcaaagatcttatcgcagaaaactattggtgccgatttggagaatctgaat
tattgggaagctgtaataggttgcgcattgcatggaaaattaaatctggtttgccgtctc
ctagcgttgcacagcaaagcagatcattcggcgttcatcactgcagataatattatcagg
acaatgccggtgtataatgtgtacggcggatattccgtgaacgaatttattacccggtgg
aaacactggcaaatggatctctgctccaatctagaaagcaattattttgctagggatagt
gatttggagacactcatgaagttaatagcaggagatgaatcaatattgtgggaatattcc
aagtatacagatgcgtggtatgaattattggcagcaaaattattttatactgctccttgc
tgcaagcaacaggaactttcgcgctacgcgaacagtgttgctgagagatggcaagctaat
cgacacttagaccgcataattcttgctttaatggaaaacgacttgtatcaagtcattaaa
gaaatacagtatatgagtgataacggctggtttgcagctcatttgatagatttactgtac
aaatgtggaaaattgaatattttgaatcaggaaaaggctaatgtaactgcgcagcttcat
gagtctctgatattggagtacgcaactacgttaatgagccatcgctcgttgtggcagtgt
ggcgcgagttacttgattcattgccctatgcaaggtttggccagattagagattctcttg
caatcgctgccgacaggcacagaagcgagagttaataagatcatcgacgtcgcacgagac
aataacatgctgcacgttgttagcagtatatgcaagatccaaggaatgaagagcataaaa
caaggcaggctgggcaatgctctcacgtgggcgctcagggcacacgatggcaactttatt
acgtacatcgcggacgaatttctaaaatgttacgcggaacacggagaactggagtgtcgc
gatttgctggagaacttgggttcctgcatgttggctagcgataggctcacatttttaggg
aaatattgtgagtttcataaaatgtacacaatggacgagtttcgtgaggcaggaaattta
ttggtgtctcttctggtctcgaatctgacaccgaaatatttttggtctattctgcttacg
gacgctataccactgttggaagcagaagatgttattttctcctccaatgactgctacgaa
ttactacgttgcgtagaagctcatggcaacgatccgaagtttcaagacaaggtctccatc
tttcgaataggcgttgcacgaaacctggcacgagctttaagtttagaaggctgtcaggcc
gaacattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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