KEGG   Linepithema humile (Argentine ant): 105680144
Entry
105680144         CDS       T04898                                 
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03022  Basal transcription factors
lhu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105680144
  09124 Replication and repair
   03420 Nucleotide excision repair
    105680144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhu03021]
    105680144
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105680144
Transcription machinery [BR:lhu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105680144
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105680144
SSDB
Motif
Pfam: PH_TFIIH BSD Voldacs
Other DBs
NCBI-GeneID: 105680144
NCBI-ProteinID: XP_012236022
Position
Unknown
AA seq 560 aa
MTTSSEDVLMQVSQVRFKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGTSSTFHFVNKNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRT
LQEHPMLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKIQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDVIECIFKTYPAVKRKHQENVPHKISESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDLQSGINDPLVDITSFEDQSLDENYGSGCSKSDKASGNIVHQSM
IKRFNQHSIMVMKASTAKQSMQSNQPQLNGSTPSASNKVANNEPDDGPKTKKRRIQEKIT
YDDLDTSCDINTNNGAPLNLTHVDRYLHGPVPGYGDTEPTSEELLITLSHLKREAYGWIS
GNALPRQAATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLEKDLRNVYVCAC
ELLRHFWRSFPPTTLQLEEKAIRMHEALHRFHSAKLKPFEDRVQREFSAVSQHLTSHLNQ
LLNTAYRKFAVWQQRKMQMR
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgaccacatcatcagaagatgttttgatgcaagtgagccaagtgcgttttaagaaggga
gatggcacgttatatgtgatgaatgaacgaatagcatggatgcttgataacagggatact
gtatctgtcagccataaatacgctgacattaaattgcaaaagatatcaccagagggaaag
tcaaagatacaactacaagtggtattacatgatggaacatcatctacatttcactttgta
aataaaaatggacaagaagcgcaaattaaagatcgtgatgatgtaaaggaattattgcaa
caattactaccaaaatttaagagaaaggttaataaagagttagaagagaaaaatagaact
cttcaagaacatccaatgctgcttcaattatatcgtgacctagttatcacgcaagttata
tcatctgaggaattctggtcacaacatgctgcagaatatacacaagcgaaaaaaattcaa
cgtcaggaaattggtgttaatagcgcgtttctggcggatattaaaccacaaactgatggc
tgcaatggattaaaatacaatttaactgtcgatgtaatagaatgtatatttaaaacttac
ccagctgttaagaggaaacatcaggaaaatgtgcctcacaagatatcagagtccgatttc
tggacaaaattctttcagtcgcattattttcacagagatcgtattaatgctgggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaattaaagaaggaccttcagtct
gggataaatgatccattggtggatatcacttctttcgaggatcagtcactggatgagaat
tatgggagtggatgtagcaaatctgataaagcctcaggaaatattgttcatcaaagcatg
atcaagagatttaatcagcatagcattatggtcatgaaagccagcactgccaaacagtct
atgcaaagcaatcaaccacagttaaatggatctacaccatctgcaagtaataaagttgca
aataacgaaccagatgatggaccaaagactaaaaagcgtagaatacaagaaaagataact
tacgatgatctcgacacgagctgtgacataaatacaaataacggagcaccattgaaccta
acgcatgtagatagatatttgcacggacctgtaccaggatatggagacacagaaccgact
tctgaagaactactcattacattaagtcacttaaaaagggaggcttatggatggatatcc
ggtaacgcattgccacggcaagcagcaacatccttagttagtcctgctgcagcagtatcg
gctttaggtgaactaacacctggtggatccttgatgaaaggtttccgagaagaaagtctt
ggacaattaataccaaaggatttggagaaggacttacgtaatgtatatgtgtgcgcgtgt
gaattattgaggcacttttggcgaagctttcctccgacaacactacagctcgaggaaaaa
gcgatcagaatgcatgaagctttgcatagattccattccgctaaactaaagccttttgaa
gatcgtgtgcaaagagaattttctgcagttagtcagcatttgacaagccatctcaatcaa
ttgttaaacactgcatacaggaagtttgcagtgtggcaacaacggaagatgcaaatgagg
tag

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