KEGG T00166: LIC12685

Leptospira interrogans serovar Copenhageni: LIC12685

Entry

LIC12685 CDS T00166

Gene name

recD

Definition

exodeoxyribonuclease v subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

lic Leptospira interrogans serovar Copenhageni

Pathway

lic03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lic03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD AAA_22 AAA_12 UvrD_C UvrD-helicase DUF2075 DEAD T2SE AAA_18 AAA_17 PhoH AAA_28 AAA CbiA NTPase_1

Other DBs

NCBI-GI:

45658521

NCBI-GeneID:

2772590

UniProt:

Q72NZ2

Position

I:complement(3255040..3256893)

AA seq 617 aa
MGEIELIFIEKLRTDILELIQSSEFEKKKLIKVSEEDSNYILEILNSIWEATQEGSLCVP
VKQEWKKILKIKLPGLVVDRFENTEWVYFEKTYRSKIELERLLKERIENDVSVNVDTDRV
EKILKDLESKSFSLKKNQKKTIFSCLNSSFQIISGGPGTGKTTIVAFLLQILNELKQLPS
PEKIALVAPTGRAAQRLTESVQENLKKISTSLENGFLRGQTIHGLLNYKQSLGGFYYNRE
RYLPHRLIIVDEVSMVDLDLMLSLWNSIPKNETIQEGTIPFRFILIGDPHQLPSVEKGAV
LSDFLSVLESKRFHFVSKLEESNRQQPNTNGEVSKIVTLAEEILKYSPENLNLGTKIDES
FPKTNQIKENILYKSEVVWLQNIESSTSDYFSRDELVEKLWKEIFYPQIDRISSWKIQDS
FCFDKPDFIQKFQEELKRFRCLTIFRSGYWGVDAIQTKIMNLAAQNLFFGKGGNFFAKRL
SKGIYFVGLPILITRNDKSRKLFNGDIGIVLKTESTGELRAVFPIEGKLFQFALDTLPEH
EPAFVMSVHKSQGSEYDTILIYLPDSIEEEKSNGLLNRQVLYTAITRAKKQVILAGNPQT
WEIGIANFQNRNTGFRI

NT seq 1854 nt +upstreamnt +downstreamnt
atgggagaaatcgaattgatttttattgaaaaactaaggacggatattttagaactgatt
cagtcatcggaattcgaaaagaaaaaattaataaaagtatcagaagaggactctaattat
atattagaaatattgaattcaatttgggaggctactcaggaaggaagtttatgtgttcct
gtaaaacaagaatggaagaaaattttaaaaataaagctccccggtcttgtcgtagatcgg
tttgaaaatacggaatgggtgtattttgaaaaaacgtatcgttctaaaattgaattggaa
cgtcttttaaaagaaagaatcgaaaatgatgtttcggttaatgtggatacggatcgagtt
gaaaaaattctaaaggatctggaatcgaaaagtttttcactgaaaaaaaatcaaaaaaaa
acaatcttttcttgtttaaactcctctttccaaattataagtggaggacctggtactgga
aaaacaaccatagtagcgtttttattacaaattttgaatgaactaaagcaacttccttct
ccagaaaaaattgcacttgttgcaccgactggaagggcggctcagaggttaacggaatcg
gttcaagaaaatttaaaaaaaatctccacgtctctcgaaaatggatttctaagaggacaa
acgattcacggacttttaaactacaaacagtcgttaggtgggttttattataatcgagaa
agataccttccacatagactaattatcgtggacgaagtttctatggtagatttagatctg
atgctttctctttggaattcaattcctaaaaatgagacgattcaagaaggaaccattccg
tttcggtttatattgattggagatccacatcaacttccttctgtagaaaaaggtgccgtg
ttaagcgattttttatccgtgttagaatctaaacgatttcattttgtttctaaattagaa
gaaagtaatcgtcagcaaccaaatacaaacggagaagtttcaaagatagtcacactcgca
gaagaaattttaaaatattctcctgaaaatctaaacttaggaactaagatagatgaaagt
tttccaaaaacgaatcaaattaaagagaatattttatacaaaagtgaagttgtatggttg
caaaatattgaaagtagcacttccgattatttttctagagatgagttagttgaaaaactt
tggaaagaaattttttatcctcaaattgatagaatctcttcttggaaaattcaggattct
ttttgttttgataaaccagattttattcaaaaatttcaagaggaactaaaacgatttcgt
tgtcttacgatttttaggagtggctattggggagtggatgcgattcaaacaaagatcatg
aatttggctgctcaaaatcttttttttggaaagggcgggaacttttttgccaaacgactt
tccaagggaatttattttgtaggtcttcccattttaattactcgaaacgataaaagtaga
aaactttttaacggagatattggaatcgtattaaaaacggaatctaccggagaacttagg
gcggtgtttccgattgaaggaaaactttttcagtttgcgttagacactcttccagagcat
gaacctgcgtttgtaatgagtgtacataaaagtcagggatcagaatatgatacaatccta
atttatcttccagattctatagaagaggaaaaatctaatgggttactcaatcgtcaagtt
ctttatacagcaattacaagagctaaaaaacaagtgatcttggctggaaatccgcaaacc
tgggaaattggaatcgccaattttcaaaatagaaatactgggtttagaatttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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