KEGG   Leptospira interrogans serovar Copenhageni: LIC_10420
Entry
LIC_10420         CDS       T00166                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lic  Leptospira interrogans serovar Copenhageni
Pathway
lic03420  Nucleotide excision repair
lic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LIC_10420
   03430 Mismatch repair
    LIC_10420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lic03400]
    LIC_10420
Enzymes [BR:lic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LIC_10420
DNA repair and recombination proteins [BR:lic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LIC_10420
   MMR (mismatch excision repair)
    Other MMR factors
     LIC_10420
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 Viral_helicase1 AAA_30 ResIII DEAD AAA_22 PhoH AAA_11 DUF87 Herpes_ori_bp
Other DBs
NCBI-ProteinID: AAS69043
UniProt: Q72V81
Position
I:complement(478459..479760)
AA seq 433 aa
MKNKVQYSSAQQKVINENTRFVQVVAAAGSGKTSTMVGIIERILVENLFPKESVLVLTFS
RKAAIEISNRIQKVTDKNSIRVQTFHAYCLYALSQWHPKFTLKKPKILSPEEKNQFYRGF
LKKERNKIGGIPYDFFWAENIPFIQENFSELKKDLEFAYQKFKYNNGFLDFEDLVKMFLD
GLKNEEEWTSEPRSLLQKIIVDEFQDTDLEQLEFLKLLSQRASIVVVGDDSQAIYSFRGT
SPEAFLNFQHLFQPCKVHFLNTNYRSLPEIIHTSSIPIQKNHHKINKEVFPFRHEKGFVG
KIFIEEAADLIPFLNRAILTSKDDFKILCRSNFRISEYIREGIPKRYLMTIHASKGLEFH
TVFVDVADGWNARLDSTLKTIEEERRILYVGLSRAKDRLLILGTSKNSRRETIENIFFHY
FKKLKNIVPEDLI
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgaaaaacaaagttcaatacagttcagcacaacaaaaagtaatcaatgaaaacacaaga
tttgtacaagtagtcgccgccgcaggttctggtaaaacgagcacgatggttgggattatc
gaaagaattttagttgaaaacttatttccaaaagaatccgttttggttttaaccttttcg
cgcaaagccgcaatagaaatttcaaataggattcaaaaagtcacagataaaaattctatc
agagttcaaacatttcatgcgtattgtttgtatgctctcagccaatggcatcctaaattt
acattaaaaaaacctaaaattctttctccagaagaaaaaaatcaattctaccgaggattc
ttaaaaaaagaacgtaataaaatcggcggaattccgtatgattttttttgggcggaaaat
attccttttatccaagaaaatttttcagaactcaaaaaagatttagaatttgcttatcaa
aaatttaaatataacaacggctttttagattttgaagacttagtaaaaatgttcttagac
ggtcttaaaaacgaagaggagtggacctctgaacccagaagcctcctccaaaaaatcatc
gtagatgaatttcaagatacggatttagaacaacttgaatttctaaagttgttatctcaa
agagcgtctatcgttgtcgtaggagacgacagccaagcgatttatagttttcgaggaact
tctcccgaagcttttttaaactttcaacatcttttccaaccctgtaaggttcacttttta
aacacaaattaccgatctcttccggaaattatacacacatcctcgattccaatccaaaaa
aatcatcataaaatcaacaaagaagttttcccttttcgtcacgaaaaaggttttgtggga
aagatcttcatcgaagaagcagctgacctaattccatttcttaaccgagcgatccttact
tcaaaagacgattttaaaattttatgtagatctaattttaggatttctgaatatattaga
gaaggtattccaaaacgttatctaatgacgatccatgcaagcaaaggtttagaattccat
actgtatttgtagacgttgcagatggttggaacgcaagactcgattctactttaaagact
attgaagaagaaagaagaattctatatgttggcttatcaagagccaaagatcgtttattg
atcttaggaaccagtaaaaattccagaagagaaacgatagaaaatatatttttccattat
ttcaaaaaactcaaaaatatagttccggaagatttaatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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