KEGG T00166: LIC

Leptospira interrogans serovar Copenhageni: LIC_13263

Entry

LIC_13263         CDS       T00166

Symbol

rnD

Name

(GenBank) ribonuclease D

K03684

ribonuclease D [EC:3.1.13.5]

Organism

lic Leptospira interrogans serovar Copenhageni

Brite

KEGG Orthology (KO) [BR:lic00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lic03016]
    LIC_13263 (rnD)
Enzymes [BR:lic01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     LIC_13263 (rnD)
Transfer RNA biogenesis [BR:lic03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LIC_13263 (rnD)

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC

Other DBs

NCBI-ProteinID:

AAS71807

UniProt:

Q72MC5

Position

I:4001129..4002295

AA seq 388 aa
MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID
PLKLQNLESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQYS
LTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELIKRNLYE
EAISEFEKIASEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPFR
VFNNEKVVLLMKARRDMKKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTNE
EGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNPKTLDELRKMNLFSEWKVIHY
GPSILAALENVPYESNIKGLIPINKKFE

NT seq 1167 nt +upstreamnt +downstreamnt
atgcaaataaattccgattacatagtcgttgacacagctcgaagcctacaactagtcctc
atcaatctgagtcaggcggattctatttccgtagatacagagtcctcaggttattatacg
tatttttctaaggtatgtctgattcaaatttccgctaaaggaaaaaattacatcattgat
cctttaaagttacagaatttagaaagtcttggaaacttatttgaagataaaaaaatccta
aaaatatttcattctgctatcgacgacattaaagctctcaagaaagatttcggttttcaa
tttcaaaatatcgcggatacaggatttagttctcgtcttctggatcatgaacaatattcc
ctaacgtatcttgtggattactatcacaagattaaactttccaagaaggaacaaaaatcc
aattgggaaaaaaggcctctcgaaaaaagccaacttcaatatgcagccttagatacggtt
tatctggaaacgatttgggaaaaaatgaaggaagagcttatcaaaagaaatctttacgaa
gaagcaatttccgaatttgaaaagatcgcttctgaagaaccaggctctgaaggaaattct
atatctatggataagtttccggagattttggaatatagcgcagacgaaagaagatttata
tacgacacattggttttcagggacgataaatctagaaagttaaacaaggcgccttttaga
gtatttaataatgagaaagtagttctactcatgaaagcaagaagagatatgaaaaagtta
accgaaatcgtaggtaaaaaagacgcagaaacactttttcaaatctatgcaaatcctagc
ggacctccgatccaaaagtcagagctttttaaaaaaccgggagaaaaccttaccaacgaa
gaaggagaacgtttcaaacgtctgagaatttggagagagacaatcatgtcgatacgaaga
atgagtcatcagatgatgccttctaacaagatgattgcagaactctctcaaaaaaatcca
aaaaccttagacgaattgaggaaaatgaatcttttttcggaatggaaagtgatacactac
ggcccgtctatattagcggctttagaaaacgtaccttacgaatcgaatatcaaaggtttg
attccaattaataaaaagttcgaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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