KEGG   Limnohabitans sp. 63ED37-2: L63ED372_02410
Entry
L63ED372_02410    CDS       T04121                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih03410  Base excision repair
lih03430  Mismatch repair
lih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    L63ED372_02410 (recJ)
   03430 Mismatch repair
    L63ED372_02410 (recJ)
   03440 Homologous recombination
    L63ED372_02410 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lih03400]
    L63ED372_02410 (recJ)
DNA repair and recombination proteins [BR:lih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     L63ED372_02410 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     L63ED372_02410 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      L63ED372_02410 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: ALK89611
UniProt: A0A0P0MAL6
Position
2566863..2568572
AA seq 569 aa
MNLLTRDVPPRSAWALEQAGVHPLLARLYAARGVLSKDELDDALNLLLPPAGMLGTQEAA
KLLADAMAHNKRLCIVADYDCDGATACAVGVRGLRMLGANNVSYLVPDRVVDGYGLTPPI
AERVHAQGADVLITVDNGIASVAGVQAAQALGLQVLVTDHHLPGSELPSAEVIVNPNQPG
CSFTSKSIAGVGVMFYVLLALRAELRQRGVFDASNQPRLDALLPLVALGTVADVVKLDPN
NRRLVAQGLRRVRAGAMPPGMAALMRAASRETAKATTFDFGFALGPRINAAGRLADMTLG
IECLLTDDTGRADELARQLDAINRERRVIEGDMREMAMEMAESLFDEGDEPPPAICVFDP
DFHEGVVGIVASRIKDKLHRPTFVFAASSAPGKEHELKGSGRSIAGFHLRDALDLVAKRT
PGVLLRFGGHAMAAGCTIAEEHLDVFEETLNQVALEWLDAATLQRRLETDGPLPAEYRRV
DLVEMLHHEVWGQGFAPPVFCEEIEIVSQRLVGEKHLSLKMKHQGQPVEGIWFGRTEPLP
SRVKLAYRLDADEWQGQKRVRFLVEGAEL
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgaatttgctcacccgagatgtgcccccccgcagcgcctgggcgctggaacaagcgggc
gtccaccccctgctggcccgcctgtatgcggcgcgtggcgtactgtccaaagacgaactc
gatgacgcgctgaacctgctgctgcccccggcgggcatgttggggacgcaagaagcagcc
aagttgctggccgatgccatggcgcacaacaagcgcctgtgcatcgtggccgattacgac
tgcgacggcgccaccgcttgcgccgtgggtgtgcgtggcctgcgcatgctgggggcaaac
aatgtgagctacctggtgcccgaccgcgtggtcgacggctatggcctgaccccacccatt
gccgagcgggtgcacgcacaaggcgcggatgtgctgatcaccgtggataacggcatcgcc
agcgtagcgggcgttcaggccgcgcaggccctgggcctgcaggtgctggtcaccgaccac
catttgcctgggagtgagttgcccagcgccgaagtcatcgtcaaccccaaccagcccggc
tgcagcttcaccagcaaatccatcgcgggtgtgggtgtgatgttttacgtgctgctggcc
ctgcgggccgagctgcgccagcgcggcgtgtttgacgcgagcaaccaaccgcgcttggac
gctttactgccgctggtcgctttgggcacggtggccgatgtggtcaagctcgaccccaac
aaccgccgcctggtggcgcagggcctgcgccgcgtgcgggccggggccatgccgccgggc
atggccgcgctgatgcgtgccgccagccgcgaaaccgccaaggccaccacttttgacttt
ggttttgccttggggccacgcatcaacgcggcaggccgcttggccgacatgacactgggc
atcgaatgcttgctgaccgacgacacaggccgcgccgacgagctggcgcggcagctggac
gcgatcaaccgcgagcgccgcgtgatcgagggtgacatgcgcgagatggcgatggagatg
gccgagtcgctgtttgacgaaggcgacgagccgccgcccgccatttgtgtgttcgacccg
gattttcacgaaggcgtggtcggcatcgtggcctcgcgcatcaaggacaaattgcaccgc
cccacctttgtgttcgcggccagcagcgccccgggcaaggagcatgaactcaaaggctca
ggccgctccatcgcaggctttcatttgcgtgacgcgcttgatttggtggccaaacgcacc
ccgggcgtgttgctgcgttttggtggccacgccatggcagcgggctgcacgattgccgaa
gagcacctggatgtgtttgaagaaacgctgaaccaagtggccctggaatggctggacgcg
gccacgctacaacgccgtctggaaaccgatgggccgctgcccgccgaataccgccgggtg
gatttggtggagatgctgcaccacgaagtctggggccagggatttgcaccgcccgtgttt
tgcgaagagatcgaaatcgtgtcgcaacgcttggtgggcgagaaacacctgtcactcaag
atgaagcaccaaggccagccggtcgagggcatctggtttggccgcaccgagcctttgcca
tcacgcgtcaaattggcctaccggctggatgccgacgagtggcagggccaaaagcgggtg
cgctttttggtggagggcgctgagctttaa

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