KEGG   Limnohabitans sp. 103DPR2: L103DPR2_00323
Entry
L103DPR2_00323    CDS       T04120                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    L103DPR2_00323 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lim03019]
    L103DPR2_00323 (recQ)
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_00323 (recQ)
Enzymes [BR:lim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L103DPR2_00323 (recQ)
Messenger RNA biogenesis [BR:lim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     L103DPR2_00323 (recQ)
DNA repair and recombination proteins [BR:lim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      L103DPR2_00323 (recQ)
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: ALK90737
UniProt: A0A0P0MCZ6
Position
complement(367983..369848)
AA seq 621 aa
MTSSVLSTPSSNILRILSEVFGYESFRGPQQDIISHVTGGHDALVLMPTGGGKSLCYQIP
AIARQQAGLGIAIVVSPLIALMHDQVGALHEAGVSAAFLNSTLSPDETSVIEQRLRKGDI
TLLYAAPERINTPRFLAQLDSLYAQGLLSLFAIDEAHCVSQWGHDFRPEYRSLTVLHERF
PGVPRVALTATADALTRADIIERLQLEEAQLFISSFDRPNIRYTIVEKKDASTQLLRFIE
REHEGEAGIVYCQSRKRVEEVAEMLAQTGIDALPYHAGLDAALRQKHQDRFLRDEGVVMV
ATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGLRADAWMAYGLQDVVNQRRM
IDESPAEENFKQVMRGKLDALLALAEATDCRRVRLLSYFDEASQPCGNCDNCLNPPAVWD
GTDAARKLLSTVFRAQQHSGFSFGAGHIMDILRGKATEKVTQYGHTQLSTFGIGANFSEI
QLRGVLRQLIAMGALNVQGQVFNTLQLTEGSRAVLKGEVSVQLRESLSQKPEKRSRKPQA
PGPAAANLSQDALVRYINLKAWRAEVAKEHNLPAYVIFHDATLAAIAAASPQNLEDLHGI
SGLGAKKLEAYGQEVLRICKG
NT seq 1866 nt   +upstreamnt  +downstreamnt
gtgacaagctctgttttatccacgccctctagcaacatcctgcgcattctcagtgaggtg
tttggctacgagtcgttcagaggcccccagcaagacatcatctcgcatgtcaccggcgga
cacgatgccttggttctcatgccaactggcggcggcaaaagtttgtgttaccaaattccc
gccattgccaggcagcaagctggcttgggcatcgccattgtggtgtcgccgctcattgcg
ctcatgcacgatcaagtgggcgcattgcatgaggcgggtgtcagtgccgcatttttaaac
tccacgctcagcccagacgaaaccagtgtcatcgaacaacgcttgcgcaaaggcgacatc
acgcttttgtatgctgccccagagcgcatcaacacaccccgctttttggcacaactcgat
tcgctgtatgcccaaggccttctcagtttgtttgccattgacgaagcgcattgcgtcagc
caatggggccacgatttccgcccagagtaccgcagccttacggtcttgcatgaacgtttt
ccaggtgtaccgcgggttgccttaacggccacggccgacgccctcacacgtgcagacatc
attgaaagactgcaacttgaagaagcccaactcttcatcagcagcttcgatcgccccaac
attcgctacaccatcgtcgagaaaaaagatgcgtctacccaactgctgcgattcatcgag
cgcgagcacgaaggtgaggctggcattgtgtattgccagtcacgcaaacgggttgaagaa
gtggccgagatgttggcccaaaccggcatcgatgccctgccgtatcacgccggcctagac
gcggccctgaggcaaaaacaccaagaccgttttttgcgcgacgaaggtgttgtcatggtg
gccaccattgcatttggcatgggcatcgacaaaccggatgttcgatttgtggcgcatctg
gacatgcccaaaaacatcgaaggctattaccaagaaacaggccgtgcagggcgcgacggt
ttgcgtgcagatgcctggatggcgtatggtttgcaagatgtggtgaaccaacgccgcatg
atcgatgaaagtcctgccgaagaaaacttcaagcaagtcatgcgcggcaaattggatgcc
ttgttggcattggccgaagccaccgattgcagacgtgttcgcttgctgtcttattttgat
gaagccagccagccctgtggcaattgcgacaactgtttgaacccacccgccgtttgggat
ggcaccgatgcagcccgtaaattgctctccaccgttttccgcgctcaacaacacagtggt
ttttcttttggcgctggtcacatcatggacatcttgcggggcaaggccaccgaaaaggtc
acgcaatacgggcatacccaactcagcacctttggcatcggcgccaacttcagcgaaatt
caattgcgcggcgttttacgccaactgattgccatgggtgctttgaatgtgcaaggacag
gtctttaacaccctgcaactcaccgaaggctcacgtgcggttctgaaaggggaggtcagt
gtgcagttgcgtgagtctttaagccaaaaacccgaaaaacgcagccgcaaacctcaggcc
cctggcccagcggccgctaacctcagtcaagacgccttggtgcgctacatcaacctcaaa
gcatggcgggccgaagtggccaaagaacacaacttgccagcctatgtcatttttcacgat
gccactttggcagccattgctgcagcttcaccccaaaacctcgaagacctgcatggcatc
agcggcctgggcgctaaaaagctggaagcctacggtcaagaggtcttgagaatctgcaaa
ggctaa

DBGET integrated database retrieval system