KEGG   Limnohabitans sp. 103DPR2: L103DPR2_02417
Entry
L103DPR2_02417    CDS       T04120                                 
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lim00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    L103DPR2_02417 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lim01007]
    L103DPR2_02417 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lim03016]
    L103DPR2_02417 (lysS)
Enzymes [BR:lim01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     L103DPR2_02417 (lysS)
Amino acid related enzymes [BR:lim01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   L103DPR2_02417 (lysS)
Transfer RNA biogenesis [BR:lim03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    L103DPR2_02417 (lysS)
 Prokaryotic type
   Other AARSs
    L103DPR2_02417 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: ALK92799
UniProt: A0A0P0MHW6
Position
2499255..2500805
AA seq 516 aa
MSDTPAENQTTPVVDENQLIAERRSKLKALREAQAQGKGVAFPNDFKPEDRAEPLTLAHG
EKAAEALKGEGVTPVKAKIAGRMMLKRVMGKASFATLQDATGRFQIYVTRDDIGEEAYND
FKHWDLGDIVAAEGYLFKTKMGELSLHASSVRMLTKSLRPMPDKFHGVADQEIKYRQRYV
DLMMDEDARKRFTARSKAVSGIRDFMVKHNFLEVETPMLHPIPGGANARPFATHHNALDQ
EMFLRIAPELYLKRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMG
FTEELIRDAAMNAVGHLQLSYAGKPVDLAKPFARLTIREAIVKHTEAGDKVDDAAWLTQA
LQKLGMSEAKNNLSKKSLAGLQVLYFEETVEEKLWEPTFIMEHPTEISPLARANDERPEV
TERFELYITGREFGNGFSELNDAEDQVARFQAQVDAKDSGDDEAMYFDHDFVRALEYGMP
PAGGCGIGIDRLMMLLTDSPSIRDVILFPALKREQE
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgtcagacacgccagcagaaaatcaaaccacccccgtcgttgacgagaaccagctgatt
gcagaacgtcgcagcaaactcaaagccctgcgtgaagcgcaagcccaaggcaaaggcgtg
gcattccccaatgacttcaagcctgaagaccgtgcagagcccctcacactggcgcacggc
gagaaagcagccgaggccttaaagggcgaaggcgtcacgcctgtgaaggccaaaattgct
ggccgcatgatgctcaagcgcgtgatgggcaaggccagctttgccaccttgcaagatgcc
accggtcgttttcaaatttatgtcacacgcgacgacattggtgaagaagcctacaacgat
ttcaaacattgggacttgggcgacatcgtggccgctgagggctacttgttcaaaaccaaa
atgggcgagctgtcattgcatgcctccagtgttcgcatgctcaccaagagcttgcgccct
atgcccgacaagttccatggtgtagccgatcaagaaatcaaataccgtcaacgctatgtt
gacttgatgatggacgaagacgcgcgcaaacgctttacggcgcgcagcaaagctgtcagt
ggcattcgcgacttcatggtcaagcacaacttcctagaagttgaaacgcccatgctgcac
cccattcctggcggtgccaatgcacgtccctttgccacacatcacaacgcactcgaccaa
gaaatgttcttgcgcattgcgccagagttgtatctcaagcgtttgctggtgggcggtttt
gagcgtgtgttcgaaatcaaccgcaacttccgcaacgaaggtatttccgttcgccacaac
cccgaattcaccatgatggagttctatgcggcgtattggaactaccaagacttgatgggc
tttaccgaagaattgattcgcgatgccgccatgaatgccgtgggccatttgcaactgagc
tatgccggcaaaccggtcgacttggccaagccatttgcacgcctcactattcgtgaagcc
attgtgaaacacactgaggctggcgacaaagtggacgacgcggcatggctcactcaagcc
ctgcaaaagctgggcatgagtgaagccaagaacaacctgtctaagaaatcattggccggt
ttgcaggtgttgtacttcgaagaaaccgtggaagaaaaactgtgggagcccacgttcatc
atggagcaccccaccgaaatttcccccttggcccgcgccaacgatgagcgcccagaagtg
accgagcgttttgagctctacatcacaggccgtgaatttggtaacggcttctctgagttg
aacgacgccgaagaccaagtggcgcgcttccaagcacaagtggatgccaaagacagcggc
gacgatgaggccatgtactttgaccacgactttgtgcgtgccttggaatacggcatgcca
cctgctggcggttgcggcattggcattgaccgcttgatgatgctgctgactgacagcccg
agcattcgcgatgtgattttattccctgcacttaagcgagaacaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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