KEGG   Limnohabitans sp. 103DPR2: L103DPR2_02559
Entry
L103DPR2_02559    CDS       T04120                                 
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
lim  Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:lim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_02559 (phrA)
Enzymes [BR:lim01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     L103DPR2_02559 (phrA)
DNA repair and recombination proteins [BR:lim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    L103DPR2_02559 (phrA)
 Prokaryotic type
    L103DPR2_02559 (phrA)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Usp
Other DBs
NCBI-ProteinID: ALK92939
UniProt: A0A0P0MIF7
Position
2638578..2640068
AA seq 496 aa
MHKPFSTGLVWFRRDLRVADNTALFHALKNCTKVQCVFVFDTGILNELPRKDRRVAFIQA
SLVELDQLLRQAAQEAGLDAKAAAQVGLIVLHGNPIQEITDLAKQIEAQAVFANHDDEPA
ALARDAQVRGALANAGIALHTYKDHVVFERQEVLTLAGNPYTVFTPYKNAWLKKVQPQDL
APHPIAEHAAALAPRPKALQLPVPTLPDIDFEEVDLTALHYKTGFSGGQALLEDFLHRID
RYEETRNFPAVKGPSYLSVHLRFGTVSVRQLALEAWRRYKTSEGASVWLSELIWRDFYAQ
ILANFPHVAERSFKAEYDAIQWDHGPHGKALFAAWCEGRTGYPLVDAAMAQINQTGYMHN
RLRMVVASFLTKDLGVDWRWGEKYFAQHLIDFDLSANNGGWQWASSSGCDAQPYFRIFNP
VTQSEKFDPQGKFIKRYLPQLAGLQGADIHAPWDAKPLALQAAGVTLGKDYPLPVVNHAE
AREKTLARYAVVKKAS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgcacaaacccttttctaccggcttggtctggtttcggcgagatttacgcgttgccgac
aacacagccctgtttcatgccctcaaaaactgcaccaaagtgcaatgcgtgtttgtcttt
gacaccggcatcctgaacgagttgccccgaaaagaccgccgggtcgccttcattcaagct
tctttggtcgaattggaccaattgctgcgccaagccgcccaagaggcagggcttgacgcc
aaagcagccgcccaagtgggtctgattgtgttgcacggtaatcccatccaagaaattacg
gatcttgccaagcaaattgaggctcaggccgtctttgccaaccacgacgacgaaccggcc
gccttggcccgcgatgcccaagtgcgcggtgccttggccaacgcaggcattgccctgcac
acctacaaagaccatgtggttttcgagcgacaagaagtgctcaccttggccggcaacccc
tacaccgtgttcacgccttacaaaaacgcttggctcaagaaggtgcagccccaagatttg
gcgcctcaccccattgccgagcacgctgcggcattggcgccccgccccaaagccctccaa
ttgccagtgccgactcttcctgacatcgacttcgaagaagtcgacctcacagccttgcac
tacaaaacgggcttttctggcggccaggctttgctagaagactttctgcaccgcatcgac
cggtacgaagaaacccgcaatttcccagccgtcaaaggccccagttatctcagtgtgcat
ttgcgatttggcaccgtatctgtccggcaattggccctcgaagcatggcgtcgctacaaa
accagtgaaggggccagtgtctggttgtccgaactcatttggcgtgatttttacgcccaa
atcttggccaacttcccccacgtggccgagcgaagtttcaaagccgaatacgacgccatc
caatgggaccacggcccccacggcaaagccctgtttgccgcatggtgcgaaggccgcacg
ggctacccgctggttgatgcggccatggcccaaattaaccaaacgggatatatgcacaac
cgcctgcgcatggtggtggcctctttcctcaccaaagacctgggggtggactggcgttgg
ggcgaaaaatactttgcccagcacctcatcgactttgacctctcggccaacaatgggggc
tggcaatgggccagctctagcggatgcgatgcccagccctactttcgcattttcaacccc
gtcacgcaaagcgaaaagtttgacccgcagggcaaattcatcaaacggtatttgccgcaa
cttgcgggcttacaaggcgcagacatccatgcgccatgggatgccaaaccactggctttg
caagcggctggggtgacattgggaaaagactatcccctgcccgtggtgaaccacgcagag
gcccgagagaaaacgctggcgcgctacgccgtcgtcaaaaaagcgtcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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