KEGG T00067: lin1544

Listeria innocua: lin1544

Entry

lin1544 CDS T00067

Definition

hypothetical protein

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

lin Listeria innocua

Pathway

lin03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:lin03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 AAA_22 AAA_12 AAA_16 NTPase_1 AAA_28 UvrD-helicase DUF2075 T2SE AAA AAA_17 Zeta_toxin AAA_18 UvrD_C UPF0079 cobW ABC_tran

Other DBs

NCBI-GI:

NCBI-GeneID:

Pasteur:

UniProt:

Position

complement(1544432..1546828)

AA seq 798 aa
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNAIWDEKDIIVTGFF
PALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAEN
IVDTIGDDAITKILSDPSLLNTVPKLPSGTAESLLASLRENQGLEHVMVGLNEYGFGPQL
SMKIFQVYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQAILLQQIEKLAEEQKIITENTRVYM
PSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLLALGELEERIGVHYGESQRAALEQALM
SPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDGATFPVLLAAPTGRAAKRMS
ESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQFPTVALSDIYRQKDGSSIIEMAHYIKEGMLPAD
FAKNSADRSFFHCTVNQIGDVVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQ
EIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQD
LIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLMSEDVMLEQMTNKRILTAENITE
IDPLIGMEGITPEQFMAG

NT seq 2397 nt +upstreamnt +downstreamnt
atggctgaacaagaatctctcgccttatttaatgataccccagaagaacttttcatgaag
gggacgatgttgtctaccattttttataatgccgaaaacctcttttctgtggtaagaatt
ctagtaaaagagacgaatgcgatttgggatgaaaaggatattattgtaactggttttttc
ccagcacttcatgaacaagaagtgtatactttttacggaaaaatgcaggaacatgctaaa
tttggtcagcaatttaaagcggaccggtttcgaaaagaaatgcctcaatctcgcgctggc
ttgattaactatctttcaggggaacttttcaaagggattggtaaagtaacagcggaaaac
attgtcgatacaattggtgatgacgcgattacgaaaatactatctgacccaagtttacta
aatactgttcctaaactgccttctggaacagcggaaagtttgcttgcttcccttagagaa
aatcaaggtttagagcatgtgatggttggtttaaatgaatatggctttggcccgcaatta
tccatgaaaatttttcaggtatataaacaaaatgcgatcgaagtgctagaaaataatcct
tataaattaattgaagatgttaaaggaattggtttccagcgtgctgatgagcttggacgt
aagcttggacttggcggaaaccatccagaacgacttagagcaggaattttatttatgcta
gattccgtttgtatgcagcaaggtcatgtctatatggaacaagaggttttgctcggggaa
gtaacttatctgctagaagaaagtgaaggcattaggattgatcaggcaattttactgcaa
caaatagaaaaacttgcagaagaacaaaaaataattaccgaaaacacgcgcgtctatatg
ccgtcactttattattcagaaagcggttttgcttaccatgtaaaacgaatgttaaagcaa
acagagtatcaagaacaatttccgcaatcggagtttttattagcgcttggggaacttgaa
gagcgcattggcgtgcattacggggaatctcaacgtgcggcattagaacaagctttaatg
tcaccgatgcttgttcttactggaggaccaggaacagggaaaacgactgttattaaagga
attgtagaattatatgccgagttaaatggtgttagtcttgatccacatgcctataaagat
ggtgcgacttttccagtgttactcgcagctccaacaggtcgtgcggctaaacgaatgtct
gaatccactggccttccagcaatgacgattcaccggttacttggaatgaatggccaagaa
cagatggatgacgatgcagaacgattaattgatggacgtttgttaattgtggatgaaatg
tcaatggtggatatttggcttgcgaatcaattattccgcgctttacctgctcatatgcaa
gtagtgctcgttggcgaccaagaccagcttccatctgttggacctggtcaagtattaaaa
gatattcttcaatcagaacaatttccgacggttgcactttcagatatttatcggcaaaaa
gatggttcttccatcattgaaatggctcattatatcaaagaaggaatgctgccagctgat
tttgcgaaaaatagtgccgatcggtcatttttccactgtactgtaaatcaaattggtgac
gttgtggaacaagtcgtgaaaaatgctaaaaataaaggttttcgtgcaaaggatattcaa
gtgttggctccaatgtatcgcggtccagctggaattgatatattaaataaaaaactacaa
gaaatctttaatccaaacgatactggtcgacgaaaagaagtacaatttggcgaaatcaaa
taccgggttcacgacaaagtgttgcaactaatcaaccaaccagaaaaaaatgtttttaac
ggtgacattggcgaaatcgtatccattatttatgccaaagaaaatacggaaaaacaagat
ttaattgtcgttcaatttgaccaaacggaggtttcttattatcggcaagaatttaatcaa
ttgacccatgcgtattgttgttcgattcataaagcgcagggtagtgaatttccgattgtt
ataatgccaattgtgcgtagttattaccggatgttgcgtagagatttgttatataccggc
gttacaagaagtaaacaattcctaattctttgcggagaagaagaagctttccgaatgggt
gtagaacgtgtagatgaaaataagcggaatacaacgctatcggaacgtttaatgagtgaa
gatgtgatgctcgaacaaatgacaaataaacgaatattaactgccgaaaacattacggag
attgatccgttgattgggatggaaggaattactccagaacaatttatggcaggatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   PASTEUR-LIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

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