KEGG   Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_04990
Entry
JL53_04990        CDS       T03402                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
lio  Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JL53_04990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lio03019]
    JL53_04990
   03009 Ribosome biogenesis [BR:lio03009]
    JL53_04990
Messenger RNA biogenesis [BR:lio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     JL53_04990
Ribosome biogenesis [BR:lio03009]
 Prokaryotic type
  rRNA helicases
   JL53_04990
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_19 NABP
Other DBs
NCBI-ProteinID: AIS62122
UniProt: A0A097B3P3
Position
1037175..1038755
AA seq 526 aa
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDNVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKGGNGKGGKGGGGYRGGSGKGGSYRDRNN
SGKGRRSGGGSGGGNGSGGGNRDRRGNGEQRPSGGGNKGSYSQKSK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacgccaatccaagaaaaaacaattccactaggattagca
ggtaaagacttaatcggacaagcacaaacaggtactggtaaaacagccgcttttggtcta
ccaatgattcacaaaattgaccaaaaaagtaataacgtacaagctttaattatcgctcca
acacgggaacttgcaatccaagtttcagaagagctttataaactcagctatgacaaacat
gtacgtgtgctagcggtttatggtggtagtgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagacaacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgacgatatcgaaactattcttaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtattggtgaacgtttcatgcat
agcccagaacttattcgtattaaagcgaaagaaatgactgcactattaatcgaacaattc
ttcgtaaaagtgcacgaaaaagaaaaatttgacgtattatcgcgtttgctagacgtacaa
gcaccagaacttgctattgtttttggtcgtacaaaacgtcgtgtagatgaattatctcgt
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttaacgcaagcaaaa
cgtatgagcgtactgcgcaaatttaaagaggggaaaattgatgttctagttgcaacagac
gtagcagcacgtggacttgatatttccggcgtaactcacgtatataactatgacattcct
caagatccagaaagctatgttcaccgtattggtcgtactggtcgtgctggtaaagaaggt
atggcaattacattcgtacaacctcgtgaaatgggttacctgcgtatcgtagaagaaact
acgaaaaaacgtatgcagccacttcaagctcctacttgggacgaagcttttgcaggccaa
ttacgtgtagcaacagaaaaaattcaagaagcaattacagaagaaaatcttgccgattac
aaaacttttgctaatgaattattagaaaaatatgatgcaacagacatcgcagctgcaatg
cttaaaatgctagctaaagaaccagacaaaacaccagttcatattaccgaagagcgtcca
ttaccatctcgtggtggtggcggctacaaaggtaaaggtggaaatggtaaaggcggcaaa
ggtggcggcggctatcgcggcggaagcggtaaaggcggaagctatcgcgatcgtaacaac
agtggaaaaggtcgtcgtagcggcggcggttccggtggtggaaacggttctggcggcgga
aatcgtgatcgtcgtggaaacggcgaacaacgtccaagtggtggcggaaacaaaggaagc
tactcacaaaaatctaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system