KEGG   Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_13675
Entry
JL53_13675        CDS       T03402                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
lio  Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JL53_13675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lio03021]
    JL53_13675
   03019 Messenger RNA biogenesis [BR:lio03019]
    JL53_13675
Transcription machinery [BR:lio03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     JL53_13675
Messenger RNA biogenesis [BR:lio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     JL53_13675
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N ATPase_2 OB_RNB NACHT AAA_22 AAA_25 AAA Spore_III_AA Mor
Other DBs
NCBI-ProteinID: AIS63697
UniProt: A0A097BGA9
Position
complement(2779504..2780775)
AA seq 423 aa
MAKLSIAYLESLTIKDIYALAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETEKTPISTRTIDLISPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPDSELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQSDGLDISERFVRYLKKTANNEAFYELLQEEM
FKK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggctaaactgtccattgcatacttagaaagtttaacaattaaagatatttatgcccta
gcaaaagaacataaaattgcctattatagcaaactaaccaaaagagagctgatttttgcg
ctattaaaatcaaatgcagaaaaagagggattcttctttatggaaggtgttttagaaatc
atcccgaatgaagggtttggtttcttacgaccgattaattattcatccagttcggaagat
atttatatttcggcttcacaaatcaggcgttttgaacttagaacaggggataaagtctct
ggtaaagtccgcccaccaaaagaaaatgaacgttattttggattattgcatgtcgaagca
gtcaatggagagaatccagaagttgcgaaagaaagagtgcattttccaggattgactcca
ctttacccagatcgtcaaattcatttagaaacagaaaaaacgccgatttctacaagaaca
atcgatttaatctctccaataggttttggacagcggggattaattgttgctcctccaaaa
gctggtaaaaccgttctattaaaagaaattgccaatgcgattacaactaatcacccggat
tcagaattgattgtcttgctaatagatgagcgccctgaagaagtaacggatatcgaacgt
tcggtaaaagcagatgttgtaagctctacgtttgatgaggtgccagagaaccacattaaa
gtagccgaattagtcttagaacgtgcgatgcgccttgtggaacaaaaacgagatgtagtt
attttgatggatagtattactagattagcaagagcttataatttagttattcctcctagt
ggtcgaacgctttcgggggggattgacccagcagctttccataggccaaaacgttttttc
ggtgcagcacgtaatattgaagaaggtggtagtctaacaatccttgcaacagcacttgtg
gatacaggttcgcggatggacgatgtcatttatgaggaatttaaaggaactggtaacatg
gaattacatttggatcgtcaattggctgaacgtcgtgtctttcctgctattgatatgcgt
cgttcaggaacaagaaaagaagaactactattatctaaagagcgcttagagcaactttgg
aaaattagaaaagcgatgccaaaacaaagtgacggacttgatatttctgagcgtttcgtc
cgctatttgaaaaaaacagcaaataatgaggcgttttatgaattattacaagaagagatg
tttaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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