KEGG   Lawsonia intracellularis N343: LAW_00979
Entry
LAW_00979         CDS       T02437                                 
Symbol
gidA_2
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lir  Lawsonia intracellularis N343
Brite
KEGG Orthology (KO) [BR:lir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lir03016]
    LAW_00979 (gidA_2)
   03036 Chromosome and associated proteins [BR:lir03036]
    LAW_00979 (gidA_2)
Transfer RNA biogenesis [BR:lir03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LAW_00979 (gidA_2)
 Prokaryotic type
    LAW_00979 (gidA_2)
Chromosome and associated proteins [BR:lir03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LAW_00979 (gidA_2)
SSDB
Motif
Pfam: GIDA GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox_2 Pyr_redox FAD_binding_2 DAO Pyr_redox_3 HI0933_like PA28_alpha ThiF NAD_binding_8
Other DBs
NCBI-ProteinID: AGC50374
Position
1181835..1183703
AA seq 622 aa
MRTTFDCIVVGGGHAGCEASMALARLGQKVLLITGNVDRIGHLSCNPAVGGIAKGHIVRE
IDALGGMMGLWADKAGIQFRTLNRSKGPAVRATRAQVDRDLYMQAVKQDIFSQPNLSVWQ
DTVEAIIVKDGHTGGVKTALGQLFNSQYVILTTGTFLSGLMHIGQKNFSGGRLGDVGTSK
LSSSLHSIGLHLGRLKTGTTPRLLKTSIDFTSMEMQLGDTPIPSFSFHGPKPSQPQVPCY
ITWTNEYTHDVIRSGMDRSPMFTGVITGTGARYCPSIEDKVARFADRDRHQIFVEPEGLT
SQECYINGISTSLPLDIQLALIATIPGLENAHMVRPGYAIEYDYVDPMQLHPTLETKVLP
GLWLAGQINGTSGYEEAAGQGLWAALNVFCKITRQEPFILGRDNAYLAVLVDDLVTQGTK
EPYRMFTSRAEYRLLLREANADIRLTPLGRKIGLVGDYQWNLFQKKISDIDTLVNRLQNI
RIKPDTLDPSIFLELGESIPNRAYTLEELLKRPSITFQTLRKIYSDLPITSEDVYLETET
IIKYAGYLDRQEELVQRSAKLEHSYLPKEIDYTKVAGLSSEVIEKLQIVRPQTLGQAGRI
SGVTPAAITCLEIYLKKIHAFR
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgaggacaacatttgattgtatagttgttggtggtgggcatgctggctgtgaagcttct
atggctttagcacggttaggccaaaaagtacttttaattacaggtaatgttgatagaata
ggacatttatcttgtaatccagcagttggtggtattgcaaaaggacatattgttagagaa
attgatgctcttggtggtatgatgggtttatgggctgataaagcagggatacagtttaga
acattaaacaggagtaaaggaccagctgttagagcaactagggcacaagtagatcgtgat
ttatatatgcaagctgtaaaacaagatattttttctcaacctaatttatctgtttggcaa
gatacagttgaggctattattgtaaaagatggacatacaggaggtgttaaaacagcactt
gggcaattatttaatagtcaatatgtcattcttacaacagggactttcctttctggattg
atgcatataggacaaaagaatttttctggaggaagattaggtgatgtaggaacttcaaag
ctttcatcatcacttcactctatagggttacatttaggccgcttgaaaactgggactact
cctaggttacttaaaacgtctattgattttacatcaatggagatgcaattgggtgataca
ccaatcccatcctttagcttccatggtccaaagccttctcaaccacaagttccatgttat
atcacttggacaaatgaatatactcatgatgtaatccgatcaggaatggatcgttcacct
atgtttacaggtgttattactggaacaggggcacgttattgcccatcaatagaagataaa
gtcgcacgttttgcagatagagatcgtcatcagatatttgttgaacctgaaggattaact
agtcaggagtgttatattaatggaatttctacaagtttacctttagatatccaattagca
ttaatcgcaactattccagggcttgaaaatgcacatatggtgagaccaggatatgctatt
gaatacgactatgttgatcctatgcaattgcatcctacacttgaaacaaaggttctccca
ggtctatggctagcaggacaaataaatggaacatcaggttatgaagaagctgcaggacaa
ggattatgggctgcactgaatgtattctgtaaaattacacgacaagagccatttatttta
ggacgagataacgcgtatttagctgtattagttgatgatcttgttacacaagggacaaaa
gagccatataggatgttcacctctagagctgaatatagattgttgttgagagaagcaaat
gctgatattagattaacaccattaggaagaaaaatagggttagttggcgactatcaatgg
aatttatttcaaaaaaagatatcagatatagatacacttgttaatagattacagaatatt
aggataaaaccagatacattggaccctagtatatttttagaattaggagaaagcattcct
aatagggcatatacattagaggagctattaaaacgtccttctattacattccaaaccttg
agaaaaatatattctgatttacctataacttcagaagatgtatatttagagactgaaact
attataaaatatgctggctatcttgaccgtcaagaagaacttgtacagcggtctgcaaag
ttagaacattcatatcttcctaaagaaatagattatactaaagttgcaggactttcttca
gaagttatagaaaagttacaaatagtaagacctcagacacttggacaggctggtcgtatt
tcaggagtaactcctgctgctattacatgccttgaaatatatttaaaaaagatacatgct
tttagataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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