KEGG   Leptospira interrogans serovar Linhai: LIL_10222
Entry
LIL_10222         CDS       T03859                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lis  Leptospira interrogans serovar Linhai
Pathway
lis03030  DNA replication
lis03430  Mismatch repair
lis03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LIL_10222 (dnaE)
   03430 Mismatch repair
    LIL_10222 (dnaE)
   03440 Homologous recombination
    LIL_10222 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lis03032]
    LIL_10222 (dnaE)
   03400 DNA repair and recombination proteins [BR:lis03400]
    LIL_10222 (dnaE)
Enzymes [BR:lis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LIL_10222 (dnaE)
DNA replication proteins [BR:lis03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LIL_10222 (dnaE)
DNA repair and recombination proteins [BR:lis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LIL_10222 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 tRNA_anti_2 HROB
Other DBs
NCBI-ProteinID: AJR12824
Position
1:252781..256302
AA seq 1173 aa
MSLTMQDFAHLHLHTNYSMLDGAIRIKELMQHVKECGMSSVAMTDHGNMFGAVEFYNEAI
KQGIKPIIGSEFYVSPNRKQETEMVKIADGNAYHLILLAKNEEGYKNLIRLSSKSYTEGF
YKKARIDYDLLDRHSEGLVCLTACLAGEVNRKILEGKIDESFQLAGKLNEIFRKEDFYME
IQNHGIPEQMTVAKQVYEFGKKTGIPLVVTNDSHFLKKNDQEAQDILLRIGMQKRITDPM
EFGFNGEFYVKNGDEMAKIFPEIPEAFYNTLEISNKVNLKLQFGNYLLPEFEVPEGYDAD
SYLEKLIWEGIERKYPNLSPEIKERVIFELNTIKNMKFAGYFLIVQDYINYAKRNGIPVG
PGRGSAAGSIVAYALGITNVEPLQHNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIR
RRYGEEKVGQIITFNSLAAKAALKDVARVLNLPFGEANEMTKAFPNKLGMSISEALSTSS
ELKNFSEKDDINHKIFAIAQRLEGNYRQPGRHAAGVVISPYPLEEVVPLSTVAEKEKPGV
RAIVTQYDKNNLESIGLIKMDILGLKNLTTLDYAIKLIEQRRGIRINLDEISYDDANTYS
LLRKANTLGIFQLESTGITDLVAKSQVSNFDEIVALIALYRPGPMGEGMLDEYLDRKSGK
KQVTYPHPSCEPILKETFGVPVYQEQVMSISRVVGGFSVGDSDVLRKAMAKKKADLMDKL
KVQFVEGAVKQGIQEKVAKDLFEQLERFGGYGFNKSHSVAYAIITYQTAYLKANYTIEYL
TALLASDHGKTTDIVKYINNAREMGIQILNPDVSESQASFSVIDNTTIRFGLSAMKGVGE
TAANSIIQARTKVGSFRTLQDFALNIDTRLINKKVFEALIQAGALDSFGYTRKCLFESVD
SILTFAQKEQERANEGQFSLFGNEESSFSLNLPKDALEWEIDEKLKREKAIAGLYLSGHP
LDKYEKQLKSLKTIPIEKFDDLKSGTKVEVAGVISSKNIKLSKRNEEFANFKLEDRTGEI
ECVAFAKTYQKYKEFIKEDQAIFIKGDLDKIEVGDAELRGQVKVNSIEILDDATIEDKLE
KSLHLRLEERHTEDPELVPKLYALLACYKGESSVYFHIVENQEEKRVIRAHDTYSIQPIN
ELFLRLADLLGDRSVFYSVGEQLKVINKSQAAG
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgtcccttacaatgcaggattttgctcatttacatctgcacacaaattattccatgctc
gacggagcgattcgtatcaaggagttgatgcaacatgtcaaagaatgcggcatgtcttcc
gttgccatgaccgaccacgggaacatgttcggagctgttgagttctataatgaggcgatc
aaacagggcatcaagccgattatcggaagcgaattttacgtttccccaaaccgtaagcaa
gaaacggagatggtaaagatcgcggacgggaacgcataccatctcatcctacttgcaaaa
aacgaagaaggttacaaaaatctaatacgtctttccagtaaatcctacacggaaggtttt
tataaaaaagcgagaatcgattatgatcttctggatagacatagcgaaggtcttgtttgt
ttgaccgcctgtcttgcgggtgaagtcaatcgaaagattttggaaggtaaaatagatgag
tcttttcaacttgctggtaagttgaatgagattttccgtaaagaggatttctatatggaa
atccaaaatcacggaattcccgaacagatgacagtcgctaaacaagtctacgagttcgga
aagaagaccggtattccgctcgttgttacaaatgattcccacttcttaaagaaaaacgac
caagaagcgcaagatattcttcttagaatcggaatgcaaaaacgtattaccgatcctatg
gaatttggttttaacggagagttctatgtcaaaaacggggacgagatggcgaaaattttc
cccgaaattccggaagcgttttataatacattagaaattagtaataaagtaaatttgaaa
cttcaatttggaaattatcttcttcccgaattcgaggttccagaaggttatgacgcggat
tcgtatcttgaaaaattaatttgggaaggaatcgaaagaaaatatccgaatctttctccg
gaaatcaaagaaagagtgatcttcgaactcaatacgatcaaaaatatgaagtttgcaggt
tactttttaattgttcaagattatattaactacgcaaaaagaaacggaattccggtcgga
ccaggaagaggttcggcagcaggttccatcgttgcttatgcactcggaatcacgaacgta
gaaccacttcaacacaatctactttttgaaagatttttaaacccggatcgtaaagacatg
ccggatattgatactgacttttgtgtggaacgcagagaagaagtaatcaattatatacgt
agaagatatggagaagaaaaagtagggcagatcatcacattcaattctcttgcagccaaa
gcggctctcaaagacgtagcacgggtattgaatcttccttttggagaagcgaatgaaatg
acaaaggcgtttccaaataaattaggaatgtctatttcagaagctttatccacttcttcc
gagttaaaaaacttttcggaaaaagacgatattaatcataaaatttttgcgatcgctcaa
agattagaaggaaattaccgtcagcctgggagacatgctgcgggtgtggtcatttctcct
tatcctttagaagaagtagttccactttccacggttgcggaaaaggaaaaaccgggtgtt
cgtgcgatcgtaactcaatacgataaaaataacttagaaagtatcggtcttatcaagatg
gatatcttgggtctaaaaaacttaacgaccttagactacgcgatcaaactcattgaacaa
agaagaggaattcggattaatctggatgaaatttcttatgacgatgcgaatacatactct
cttctcagaaaagcaaatactttaggtatattccagttagaatctactggaattacggat
ctggttgcaaagagccaggtaagtaatttcgacgaaattgtagccttgatcgctttgtat
cgtcccggtccgatgggagaagggatgttggacgaatacttggaccgtaaatctggaaaa
aaacaagtcacttatccacatccatcttgtgaaccaattttgaaagaaacattcggagtt
ccggtttatcaagaacaggtgatgagtatttcccgtgttgtcggaggattttcggtcgga
gattccgacgtattgcgtaaagcgatggcaaagaaaaaagccgatctgatggacaaactg
aaagttcagtttgtagaaggtgcggtcaaacaaggaattcaggaaaaggttgctaaggat
ctttttgaacagttggaaaggtttggtggttacgggtttaacaaatcgcattcggtcgct
tatgcgatcattacttatcaaacggcttacttaaaagcgaactatacaatcgaatatctc
acggctcttcttgcctccgatcacggtaaaacgactgacatcgtaaaatatatcaataac
gcaagagaaatgggaattcaaattctcaatccagatgtttccgaatcccaggcttctttt
agcgtgatcgacaatactacaattcgtttcggactttccgctatgaagggagtgggagaa
acagctgcaaacagtatcattcaagcgagaaccaaagtaggaagttttagaaccttacag
gacttcgcattaaatatagatacaagattgatcaacaaaaaagtttttgaagctctaatt
caagcgggagctttagattcttttggttatactcgaaaatgtctttttgaatctgtagat
tcgattttaactttcgcacaaaaagaacaagaaagagcaaatgaaggacagttttcactt
tttggaaacgaagaaagttctttttctcttaatcttcccaaagatgcgcttgaatgggaa
attgacgaaaagttaaaaagagaaaaagcaatagcaggtctttatctttccggtcatcct
ttggacaagtatgaaaaacaacttaaaagtttaaagacaatcccaatcgaaaaattcgat
gatttaaagtccggaactaaagtggaagttgcaggtgtaatttcttctaagaacatcaaa
ctcagtaaacgaaacgaagaatttgcgaacttcaaactagaagatagaaccggcgaaata
gaatgtgtagcttttgcaaaaacatatcagaaatataaggaatttataaaggaagatcaa
gctatctttatcaaaggcgacttggataaaattgaggttggagacgcggaacttcggggt
caggttaaagttaacagtatcgaaattttagacgacgcgacgatcgaggataaacttgaa
aagtcgcttcatcttagactggaagaaaggcatacggaagatcctgaactggttccgaaa
ctttacgcattgcttgcttgttacaaaggagaatcttccgtgtattttcacattgtggaa
aatcaagaagaaaaaagagtaattcgtgctcatgatacctactcgatccaaccgatcaat
gagcttttcttacgattggcagatcttttaggagatcgttccgtattttattctgtagga
gaacaactcaaagtgatcaataaaagccaggctgcaggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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