KEGG   Lotus japonicus: Lj0g3v0258839.1
Entry
Lj0g3v0258839.1   CDS       T04348                                 
Symbol
Lj0g3v0258839.1
Name
(Kazusa) -
  KO
K14777  ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj0g3v0258839.1 (Lj0g3v0258839.1)
Enzymes [BR:lja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Lj0g3v0258839.1 (Lj0g3v0258839.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  90S particles
   Helicases
    Lj0g3v0258839.1 (Lj0g3v0258839.1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CMS1 AAA_22
AA seq 384 aa
MEEENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSG
KTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGID
MVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEI
LQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKD
CYLVYILTEMAESTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQSKRLGALNKFKS
GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYE
LEWYIQIEKLIGKKLPEYPARACW
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggaagaagagaacgaaatcgaagtgtcgaaatcgtttaaggatttgggtttgcccgat
tcattggtagaagcttgtgaaaaattgggttggacaaccccattgaagatacaggcagaa
gccattcctcttgcgctgcaaggaaaggatgtcattggacttgctcaaacaggttctggt
aagactggagcttttgcacttcccatattgcatgccctcttagaagcgcctcgcccgaat
catttctttgcttgtgtgatgtctcccacaagagagcttgctattcaaattgctgagcag
tttgaagctctaggttctgaaattggtgtcaagtgcgctgtgctagttggcgggatagac
atggtacagcaatcaatcaagatagctaagcaacctcatattattgttgggacgcctgga
cgagttttagatcacctaaaaaacaccaaaggattttctttttctcgactaaaatacttg
gttttggatgaagcagacaggctgttgaatgaggactttgaggaatcacttaatgagatt
ttacaagcgattccacgtgagcggagaacatttctattttctgctactatgactaagaag
gtccagaagctccaaagggtttgtttaaggaatcctgtgaagattgaagcagcatctaag
tattccactgttgacacattgaagcagcagtatcgcttcttgcctgccaaacacaaggat
tgttaccttgtatatattctcactgaaatggctgaaagtacgtcaatggtgttcactcgg
acatgcgattcaacccggctcctggctttgattcttaggaatctgggtctaaaagccatt
ccaattaatggtcatatgagccaatcgaagagactaggagcgttgaataagttcaagtcg
ggggagtgcaatattctcctttgtactgatgtagctagtagaggactggatattccaacg
gtcgatatggtgattaactatgacattcccacaaactccaaagattatatacatcgcgtt
ggaagaactgctcgtgcagggcgctctggggttgccatttcccttgtgaatcaatatgaa
ctggagtggtatattcaaatagagaagcttataggcaagaagctaccagagtatcctgcc
cgagcgtgttggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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